RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 A0A0B4J269 797 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 CASTOR2A6NHX0 329 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 EIF3DO15371 548 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMAD3-205ENST00000558428 GADD45BO75293 160 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-205ENST00000558428 NR1I2O75469 434 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 CLTAP09496 248 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 CXCL8P10145 99 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 IRS1P35568 1242 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 TNFSF9P41273 254 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 TUSC3Q13454 348 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 SNW1Q13573 536 aaKnown RBP13.48□□□□□ -0.25
SMAD3-205ENST00000558428 CAMK1Q14012 370 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 POSTNQ15063 836 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 KYAT1Q16773 422 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 KMT5BQ4FZB7 885 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 TMEM87AQ8NBN3 555 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 ENGASEQ8NFI3 743 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 MICAL1Q8TDZ2 1067 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 BCL7CQ8WUZ0 217 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-205ENST00000558428 POMGNT1Q8WZA1 660 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 CCDC47Q96A33 483 aaKnown RBP13.48□□□□□ -0.25
SMAD3-205ENST00000558428 SLC39A2Q9NP94 309 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 TLR9Q9NR96 1032 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 AGO2Q9UKV8 859 aaKnown RBP13.48□□□□□ -0.25
SMAD3-205ENST00000558428 STYXL1Q9Y6J8 313 aa13.48□□□□□ -0.25
SMAD3-205ENST00000558428 UBE4BO95155 1302 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 SMIM28A0A1B0GU29 152 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 FAM189A1O60320 539 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 RPN1P04843 607 aaKnown RBP13.47□□□□□ -0.25
SMAD3-205ENST00000558428 ADSSP30520 456 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 DPYDQ12882 1025 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 SKIV2LQ15477 1246 aaKnown RBP13.47□□□□□ -0.25
SMAD3-205ENST00000558428 NAB2Q15742 525 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 SLC10A6Q3KNW5 377 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 XKR4Q5GH76 650 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 ZBTB41Q5SVQ8 909 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 ALKAL1Q6UXT8 129 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 EPM2AIP1Q7L775 607 aaPredicted RBP13.47□□□□□ -0.25
SMAD3-205ENST00000558428 ZNF507Q8TCN5 953 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 PPP1R10Q96QC0 940 aaKnown RBP13.47□□□□□ -0.25
SMAD3-205ENST00000558428 NSUN3Q9H649 340 aaKnown RBP13.47□□□□□ -0.25
SMAD3-205ENST00000558428 RPF1Q9H9Y2 349 aaKnown RBP13.47□□□□□ -0.25
SMAD3-205ENST00000558428 ENTPD7Q9NQZ7 604 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 CNTN3Q9P232 1028 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 CACNG4Q9UBN1 327 aa13.47□□□□□ -0.25
SMAD3-205ENST00000558428 ANK1P16157 1881 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 MEFVO15553 781 aaPredicted RBP13.46□□□□□ -0.25
SMAD3-205ENST00000558428 KCNE1P15382 129 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 ACOT2P49753 483 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 ERVFC1P60507 584 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 PPP2R3AQ06190 1150 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 PSMD2Q13200 908 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 TCEAL5Q5H9L2 206 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 PLPP4Q5VZY2 271 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 PDE12Q6L8Q7 609 aaKnown RBP13.46□□□□□ -0.25
SMAD3-205ENST00000558428 ARMCX5Q6P1M9 558 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 TMC7Q7Z402 723 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 DDX53Q86TM3 631 aaKnown RBP13.46□□□□□ -0.25
SMAD3-205ENST00000558428 NELFCDQ8IXH7 590 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 VPS52Q8N1B4 723 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 SCFD1Q8WVM8 642 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 RABGGTAQ92696 567 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 PPP2R3CQ969Q6 453 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 FAM212AQ96EL1 285 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 ZMAT2Q96NC0 199 aaKnown RBP13.46□□□□□ -0.25
SMAD3-205ENST00000558428 TCF25Q9BQ70 676 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 PAAF1Q9BRP4 392 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 COLEC11Q9BWP8 271 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 PLEKHA5Q9HAU0 1116 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 SLC38A7Q9NVC3 462 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 MARCH5Q9NX47 278 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 PCDHGC5Q9Y5F6 944 aa13.46□□□□□ -0.25
SMAD3-205ENST00000558428 TTC26A0AVF1 554 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 LACTBL1A8MY62 500 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 F8W810 466 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 FSCN2O14926 492 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 KINO60870 393 aaKnown RBP13.45□□□□□ -0.26
SMAD3-205ENST00000558428 GARTP22102 1010 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 CA8P35219 290 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 HOXD13P35453 343 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 UBE2HP62256 183 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 STK4Q13043 487 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 PNOCQ13519 176 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-205ENST00000558428 BMS1Q14692 1282 aaKnown RBP13.45□□□□□ -0.26
SMAD3-205ENST00000558428 ENOX2Q16206 610 aaKnown RBP13.45□□□□□ -0.26
SMAD3-205ENST00000558428 ADGRD2Q7Z7M1 963 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 KIAA0895Q8NCT3 520 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 HASPINQ8TF76 798 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 NOC3LQ8WTT2 800 aaKnown RBP13.45□□□□□ -0.26
SMAD3-205ENST00000558428 SAAL1Q96ER3 474 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 KIF12Q96FN5 646 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 TIGD1Q96MW7 591 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 CBWD1Q9BRT8 395 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 PCIF1Q9H4Z3 704 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 GOLGA2P5Q9HBQ8 144 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 NGRNQ9NPE2 291 aaKnown RBP13.45□□□□□ -0.26
SMAD3-205ENST00000558428 STK39Q9UEW8 545 aa13.45□□□□□ -0.26
SMAD3-205ENST00000558428 CPSF3Q9UKF6 684 aaKnown RBP13.45□□□□□ -0.26
SMAD3-205ENST00000558428 UNC80Q8N2C7 3258 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms