RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 KLHL30Q0D2K2 578 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 BIRC3Q13489 604 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 CCSAPQ6IQ19 270 aaPredicted RBP22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 C15orf39Q6ZRI6 1047 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 CCDC170Q8IYT3 715 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 ZNF592Q92610 1267 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 STK33Q9BYT3 514 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 HAUS4Q9H6D7 363 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 GTF2IRD1Q9UHL9 959 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 GNRH1P01148 92 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 C4BPAP04003 597 aaKnown RBP22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 PPM1KQ8N3J5 372 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 CGRRF1Q99675 332 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 IRX2Q9BZI1 471 aaPredicted RBP22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 THSD7BQ9C0I4 1608 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 AKR1B10O60218 316 aa22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 CXCL8P10145 99 aa22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 GFPT1Q06210 699 aaPredicted RBP22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 ENPEPQ07075 957 aa22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 ZACNQ401N2 412 aa22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 CATSPER4Q7RTX7 472 aa22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 SAGE1Q9NXZ1 904 aa22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 TRIM17Q9Y577 477 aa22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 PTCH2Q9Y6C5 1203 aa22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 TRIP12Q14669 1992 aaPredicted RBP22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 DARSP14868 501 aaKnown RBP22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 PTK2Q05397 1052 aa22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 ASTE1Q2TB18 679 aaPredicted RBP22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 WNT8BQ93098 351 aa22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 GRIN2DO15399 1336 aa22.06■■□□□ 1.12
SNRPA1-205ENST00000558036 A0A1B0GUA9 196 aa22.05■■□□□ 1.12
SNRPA1-205ENST00000558036 EIF3CLB5ME19 914 aaKnown RBP22.05■■□□□ 1.12
SNRPA1-205ENST00000558036 FOXN3O00409 490 aaPredicted RBP22.05■■□□□ 1.12
SNRPA1-205ENST00000558036 VNN1O95497 513 aa22.05■■□□□ 1.12
SNRPA1-205ENST00000558036 EIF4BP23588 611 aaKnown RBP22.05■■□□□ 1.12
SNRPA1-205ENST00000558036 HOXA11P31270 313 aaPredicted RBP22.05■■□□□ 1.12
SNRPA1-205ENST00000558036 TATDN2Q93075 761 aa22.05■■□□□ 1.12
SNRPA1-205ENST00000558036 EIF3CQ99613 913 aaKnown RBP22.05■■□□□ 1.12
SNRPA1-205ENST00000558036 MTMR12Q9C0I1 747 aa22.05■■□□□ 1.12
SNRPA1-205ENST00000558036 TRIM10Q9UDY6 481 aa22.05■■□□□ 1.12
SNRPA1-205ENST00000558036 MYO6Q9UM54 1294 aa22.05■■□□□ 1.12
SNRPA1-205ENST00000558036 MEFVO15553 781 aaPredicted RBP22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 EVI5O60447 810 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 HLA-DRAP01903 254 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 STAG3L1P0CL83 205 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 GRK4P32298 578 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 SOX5P35711 763 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 STAT1P42224 750 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 PIK3CAP42336 1068 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 HSP90AA2PQ14568 343 aaPredicted RBP22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 SNX17Q15036 470 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 KREMEN1Q96MU8 473 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 RCCD1A6NED2 376 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 MCF2P10911 925 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 CDC42EP1Q00587 391 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 MAPK8IP2Q13387 824 aaPredicted RBP22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 SPOPLQ6IQ16 392 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 SYT10Q6XYQ8 523 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 ZNF571Q7Z3V5 609 aaPredicted RBP22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 TMEM130Q8N3G9 435 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 SH3TC2Q8TF17 1288 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 VTI1AQ96AJ9 217 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 SCN10AQ9Y5Y9 1956 aa22.04■■□□□ 1.12
SNRPA1-205ENST00000558036 SSU72P8A0A1W2PR75 194 aa22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 IPO7O95373 1038 aaKnown RBP22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 MYCP01106 439 aaPredicted RBP22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 CST5P28325 142 aaPredicted RBP22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 ARHGAP25P42331 645 aa22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 TFAMQ00059 246 aaKnown RBP22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 EFCAB13Q8IY85 973 aa22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 SLAIN1Q8ND83 568 aa22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 HELQQ8TDG4 1101 aa22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 RPF1Q9H9Y2 349 aaKnown RBP22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 ADAMTS1Q9UHI8 967 aa22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 SPA17Q15506 151 aa22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 TAF2Q6P1X5 1199 aa22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 RNF180Q86T96 592 aa22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 WDR49Q8IV35 697 aa22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 NT5C1BQ96P26 610 aa22.03■■□□□ 1.12
SNRPA1-205ENST00000558036 A0A087X0T9 212 aa22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 GOLGA6L9A6NEM1 432 aa22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 CLSTN1O94985 981 aa22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 CTSHP09668 335 aa22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 FAM228BP0C875 321 aa22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 RFX1P22670 979 aa22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 USP8P40818 1118 aa22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 KRT83P78385 493 aa22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 ARHGAP29Q52LW3 1261 aa22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 KIAA1328Q86T90 577 aa22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 PCSK9Q8NBP7 692 aaKnown RBP22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 ARID3AQ99856 593 aa22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 EIF2AQ9BY44 585 aaKnown RBP22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 LACRTQ9GZZ8 138 aa22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 HMX1Q9NP08 348 aaPredicted RBP22.02■■□□□ 1.12
SNRPA1-205ENST00000558036 FANCGO15287 622 aa22.01■■□□□ 1.11
SNRPA1-205ENST00000558036 PHACTR2O75167 634 aa22.01■■□□□ 1.11
SNRPA1-205ENST00000558036 NPTXRO95502 500 aa22.01■■□□□ 1.11
SNRPA1-205ENST00000558036 CLTAP09496 248 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms