RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 SZT2Q5T011 3432 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 CHD7Q9P2D1 2997 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 FSD2A1L4K1 749 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 MEIS3P2A8K0S8 358 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 ANKRD63C9JTQ0 380 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 CALUO43852 315 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-234ENST00000557703 EXTL3O43909 919 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 PRR29P0C7W0 189 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 IBSPP21815 317 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-234ENST00000557703 RPL13P26373 211 aaKnown RBP14.9□□□□□ -0.02
SHMT2-234ENST00000557703 ENPEPQ07075 957 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 SLC10A6Q3KNW5 377 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 COLGALT2Q8IYK4 626 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 GPD1LQ8N335 351 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 ARNTL2Q8WYA1 636 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 FBXL18Q96ME1 805 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 ZFP42Q96MM3 310 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 PPP1R10Q96QC0 940 aaKnown RBP14.9□□□□□ -0.02
SHMT2-234ENST00000557703 COLEC11Q9BWP8 271 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 APOL6Q9BWW8 343 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 NRDE2Q9H7Z3 1164 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 AGPAT3Q9NRZ7 376 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 KIAA1468Q9P260 1216 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 USP20Q9Y2K6 914 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 FAN1Q9Y2M0 1017 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 C2CD2Q9Y426 696 aa14.9□□□□□ -0.02
SHMT2-234ENST00000557703 TRANK1O15050 2925 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 SMIM28A0A1B0GU29 152 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 ZNF233A6NK53 670 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 MAPK13O15264 365 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 TGFB1I1O43294 461 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 ZC3H11AO75152 810 aaKnown RBP eCLIP14.89□□□□□ -0.03
SHMT2-234ENST00000557703 POMCP01189 267 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 GALTP07902 379 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 HOXD13P35453 343 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 GATMP50440 423 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 SCNN1GP51170 649 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 BCAR1P56945 870 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 ELAVL2Q12926 359 aaKnown RBP14.89□□□□□ -0.03
SHMT2-234ENST00000557703 EDRF1Q3B7T1 1238 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 CT47A1Q5JQC4 288 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-234ENST00000557703 USP37Q86T82 979 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 SLC39A11Q8N1S5 342 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 XXYLT1Q8NBI6 393 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 HPS3Q969F9 1004 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 PPP2R3CQ969Q6 453 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 TMEM169Q96HH4 297 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 DHTKD1Q96HY7 919 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-234ENST00000557703 C17orf80Q9BSJ5 609 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 FGFBP2Q9BYJ0 223 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 HAPLN2Q9GZV7 340 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 KCTD10Q9H3F6 313 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 CLSTN2Q9H4D0 955 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 UBQLN1Q9UMX0 589 aaKnown RBP14.89□□□□□ -0.03
SHMT2-234ENST00000557703 PLAGL2Q9UPG8 496 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 SSX2IPQ9Y2D8 614 aa14.89□□□□□ -0.03
SHMT2-234ENST00000557703 TMEM189-UBE2V1I3L0A0 370 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 PTGESO14684 152 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 PSMA7O14818 248 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 NCK2O43639 380 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 FGF18O76093 207 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 MCM4P33991 863 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 LRRC63Q05C16 580 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 GPM6BQ13491 265 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 GRIN2CQ14957 1233 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 ENOX2Q16206 610 aaKnown RBP14.88□□□□□ -0.03
SHMT2-234ENST00000557703 DCLRE1AQ6PJP8 1040 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 BRSK2Q8IWQ3 736 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 CEP120Q8N960 986 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 CACTINQ8WUQ7 758 aaKnown RBP14.88□□□□□ -0.03
SHMT2-234ENST00000557703 MRPL38Q96DV4 380 aaKnown RBP14.88□□□□□ -0.03
SHMT2-234ENST00000557703 IGSF21Q96ID5 467 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 NUP62CLQ9H1M0 184 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 NGRNQ9NPE2 291 aaKnown RBP14.88□□□□□ -0.03
SHMT2-234ENST00000557703 DMAC2Q9NW81 257 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 HSPBP1Q9NZL4 362 aa14.88□□□□□ -0.03
SHMT2-234ENST00000557703 TDRD15B5MCY1 1934 aaKnown RBP14.88□□□□□ -0.03
SHMT2-234ENST00000557703 NLRC5Q86WI3 1866 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 TRAPPC3O43617 180 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 DDHD2O94830 711 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 ARHGEF15O94989 841 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 CXCL8P10145 99 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 HARSP12081 509 aaKnown RBP14.87□□□□□ -0.03
SHMT2-234ENST00000557703 OSTNP61366 133 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 MORC3Q14149 939 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 NAB2Q15742 525 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 ZBTB6Q15916 424 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 CENPPQ6IPU0 288 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 CRELD2Q6UXH1 353 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-234ENST00000557703 DDX53Q86TM3 631 aaKnown RBP14.87□□□□□ -0.03
SHMT2-234ENST00000557703 ZNF280BQ86YH2 543 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 NELFCDQ8IXH7 590 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 KLHL23Q8NBE8 558 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 GLIS3Q8NEA6 775 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 SPPL3Q8TCT6 385 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 TSG101Q99816 390 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 CBWD1Q9BRT8 395 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 MIOSQ9NXC5 875 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 KLK14Q9P0G3 267 aa14.87□□□□□ -0.03
SHMT2-234ENST00000557703 TRIP11Q15643 1979 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms