RNA–Protein interactions for RNA: ENST00000557143.1

KLC1-222, Transcript of kinesin light chain 1, human

TSL 2

Gene KLC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLC1-222	ENST00000557143	CALML4	Q96GE6	196 aa		13.26	□□□□□ -0.29
KLC1-222	ENST00000557143	TMEM169	Q96HH4	297 aa		13.26	□□□□□ -0.29
KLC1-222	ENST00000557143	PRIMPOL	Q96LW4	560 aa		13.26	□□□□□ -0.29
KLC1-222	ENST00000557143	NTPCR	Q9BSD7	190 aa	Known RBP	13.26	□□□□□ -0.29
KLC1-222	ENST00000557143	CCSER1	Q9C0I3	900 aa		13.26	□□□□□ -0.29
KLC1-222	ENST00000557143	HAPLN2	Q9GZV7	340 aa		13.26	□□□□□ -0.29
KLC1-222	ENST00000557143	ZBP1	Q9H171	429 aa		13.26	□□□□□ -0.29
KLC1-222	ENST00000557143	PTPRH	Q9HD43	1115 aa		13.26	□□□□□ -0.29
KLC1-222	ENST00000557143	PUF60	Q9UHX1	559 aa	Known RBP	13.26	□□□□□ -0.29
KLC1-222	ENST00000557143	GIT1	Q9Y2X7	761 aa		13.26	□□□□□ -0.29
KLC1-222	ENST00000557143	C5orf42	Q9H799	3197 aa		13.26	□□□□□ -0.29
KLC1-222	ENST00000557143	NLRC5	Q86WI3	1866 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	ABLIM1	O14639	778 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	CLASP2	O75122	1294 aa	Known RBP	13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	ZSCAN22	P10073	491 aa	Predicted RBP	13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	MYB	P10242	640 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	MAPT	P10636	758 aa	Known RBP	13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	DDIT3	P35638	169 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	PPM1A	P35813	382 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	NDUFV1	P49821	464 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	KCNC3	Q14003	757 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	NAB2	Q15742	525 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	GLRA4	Q5JXX5	417 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	DDX53	Q86TM3	631 aa	Known RBP	13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	LINC00301	Q8NCQ3	95 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	DRC1	Q96MC2	740 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	FAM193B	Q96PV7	902 aa	Predicted RBP	13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	CDT1	Q9H211	546 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	UBN1	Q9NPG3	1134 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	KANSL3	Q9P2N6	904 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	ZDHHC9	Q9Y397	364 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	RALGAPA2	Q2PPJ7	1873 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	PLXNA4	Q9HCM2	1894 aa		13.25	□□□□□ -0.29
KLC1-222	ENST00000557143	CASTOR2	A6NHX0	329 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	MYMK	A6NI61	221 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	GOLGA8CP	A6NN73	597 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	C2CD2L	O14523	706 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	MBTPS2	O43462	519 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	EFEMP2	O95967	443 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	HSP90AA1	P07900	732 aa	Known RBP	13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	HARS	P12081	509 aa	Known RBP	13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	NMT1	P30419	496 aa	Known RBP	13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	NASP	P49321	788 aa	Predicted RBP	13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	DMP1	Q13316	513 aa	Predicted RBP	13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	DYM	Q7RTS9	669 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	C12orf76	Q8N812	135 aa	Predicted RBP	13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	RASSF8	Q8NHQ8	419 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	HASPIN	Q8TF76	798 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	SPIRE2	Q8WWL2	714 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	STAM	Q92783	540 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	FIZ1	Q96SL8	496 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	GPR62	Q9BZJ7	368 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	ZHX3	Q9H4I2	956 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	NGRN	Q9NPE2	291 aa	Known RBP	13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	TNFSF13B	Q9Y275	285 aa		13.24	□□□□□ -0.29
KLC1-222	ENST00000557143	ATG2A	Q2TAZ0	1938 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	PHLPP2	Q6ZVD8	1323 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	TISP43	B9A030	160 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	TNFRSF10A	O00220	468 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	LILRB3	O75022	631 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	F13A1	P00488	732 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	WEE2	P0C1S8	567 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	EPCAM	P16422	314 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	PROZ	P22891	400 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	NCKAP1L	P55160	1127 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	SMC1A	Q14683	1233 aa	Known RBP	13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	PTPN14	Q15678	1187 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	SYCE2	Q6PIF2	218 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	HAUS6	Q7Z4H7	955 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	FAM178B	Q8IXR5	827 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	MYCT1	Q8N699	235 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	PDILT	Q8N807	584 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	ANKK1	Q8NFD2	765 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	LARP4B	Q92615	738 aa	Known RBP	13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	ZMAT2	Q96NC0	199 aa	Known RBP	13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	TMEM175	Q9BSA9	504 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	MRPL4	Q9BYD3	311 aa	Known RBP	13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	S1PR5	Q9H228	398 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	GOLGA2P5	Q9HBQ8	144 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	CD207	Q9UJ71	328 aa		13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	RBM19	Q9Y4C8	960 aa	Known RBP	13.23	□□□□□ -0.29
KLC1-222	ENST00000557143	BRWD1	Q9NSI6	2320 aa		13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	SPTLC2	O15270	562 aa		13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	NCK2	O43639	380 aa		13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	CNP	P09543	421 aa	Known RBP	13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	CTSA	P10619	480 aa		13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	ZNF131	P52739	623 aa		13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	DNM1	Q05193	864 aa	Known RBP	13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	SOX4	Q06945	474 aa	Predicted RBP	13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	STK38	Q15208	465 aa		13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	ZNF568	Q3ZCX4	644 aa		13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	ZBTB41	Q5SVQ8	909 aa		13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	RRAGB	Q5VZM2	374 aa		13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	PDE12	Q6L8Q7	609 aa	Known RBP	13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	SLC39A4	Q6P5W5	647 aa		13.22	□□□□□ -0.29
KLC1-222	ENST00000557143	SHC4	Q6S5L8	630 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms