RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 TCEAL9Q9UHQ7 104 aa5.89□□□□□ -1.47
ATXN3-244ENST00000556898 MSRAQ9UJ68 235 aa5.89□□□□□ -1.47
ATXN3-244ENST00000556898 MAN1B1Q9UKM7 699 aa5.89□□□□□ -1.47
ATXN3-244ENST00000556898 FAM184BQ9ULE4 1060 aa5.89□□□□□ -1.47
ATXN3-244ENST00000556898 PCDHA5Q9Y5H7 936 aa5.89□□□□□ -1.47
ATXN3-244ENST00000556898 IGSF9BQ9UPX0 1349 aa5.89□□□□□ -1.47
ATXN3-244ENST00000556898 ALPK3Q96L96 1907 aa5.89□□□□□ -1.47
ATXN3-244ENST00000556898 KIAA1217Q5T5P2 1943 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 SOWAHDA6NJG2 315 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 H3BRB1 525 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 ADAMTS4O75173 837 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 SASH3O75995 380 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 EYA4O95677 639 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 ABL1P00519 1130 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 BMP6P22004 513 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 YWHABP31946 246 aaKnown RBP5.88□□□□□ -1.47
ATXN3-244ENST00000556898 SFNP31947 248 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 EIF1AXP47813 144 aaKnown RBP5.88□□□□□ -1.47
ATXN3-244ENST00000556898 RARRES1P49788 294 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 STAT5BP51692 787 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 PSMC5P62195 406 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 IGBP1P78318 339 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 FAAP100Q0VG06 881 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 POSTNQ15063 836 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 RAB30Q15771 203 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 MTERF2Q49AM1 385 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 XKR9Q5GH70 373 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 TMEM240Q5SV17 173 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 RASIP1Q5U651 963 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 ALKBH2Q6NS38 261 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 RINT1Q6NUQ1 792 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 RBM43Q6ZSC3 357 aaKnown RBP5.88□□□□□ -1.47
ATXN3-244ENST00000556898 HFE2Q6ZVN8 426 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 SV2BQ7L1I2 683 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 C16orf59Q7L2K0 433 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 GPBP1Q86WP2 473 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 GAS2L3Q86XJ1 694 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 C4orf19Q8IY42 314 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 SMAP1Q8IYB5 467 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-244ENST00000556898 SMYD4Q8IYR2 804 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-244ENST00000556898 CEP57L1Q8IYX8 460 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 DTWD1Q8N5C7 304 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 SYT2Q8N9I0 419 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-244ENST00000556898 GIMAP8Q8ND71 665 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-244ENST00000556898 GLIS3Q8NEA6 775 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 RDM1Q8NG50 284 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 NEK9Q8TD19 979 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 KAT2BQ92831 832 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 GLG1Q92896 1179 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 DNAJC19Q96DA6 116 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 CEP89Q96ST8 783 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 C7orf25Q9BPX7 421 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.88□□□□□ -1.47
ATXN3-244ENST00000556898 C16orf70Q9BSU1 422 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 LRFN3Q9BTN0 628 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 FUCA2Q9BTY2 467 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 FGFBP2Q9BYJ0 223 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 AP5M1Q9H0R1 490 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 RNPEPQ9H4A4 650 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 TUT1Q9H6E5 874 aaKnown RBP5.88□□□□□ -1.47
ATXN3-244ENST00000556898 ZSWIM4Q9H7M6 989 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 GPRC5CQ9NQ84 441 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 XPNPEP3Q9NQH7 507 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 KBTBD4Q9NVX7 518 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 FRRS1LQ9P0K9 344 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 RNF112Q9ULX5 631 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 DNM3Q9UQ16 869 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 USP20Q9Y2K6 914 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 KCNMB2Q9Y691 235 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 SYNRGQ9UMZ2 1314 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 KDM3AQ9Y4C1 1321 aa5.88□□□□□ -1.47
ATXN3-244ENST00000556898 A0A1W2PQ45 241 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-244ENST00000556898 A0A1W2PQY0 241 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 GRXCR1A8MXD5 290 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 NKRFO15226 690 aaKnown RBP eCLIP5.87□□□□□ -1.47
ATXN3-244ENST00000556898 USO1O60763 962 aaKnown RBP5.87□□□□□ -1.47
ATXN3-244ENST00000556898 DUSP11O75319 330 aaKnown RBP5.87□□□□□ -1.47
ATXN3-244ENST00000556898 ALX3O95076 343 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 LYPLA2O95372 231 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 RPN1P04843 607 aaKnown RBP5.87□□□□□ -1.47
ATXN3-244ENST00000556898 C6orf222P0C671 652 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-244ENST00000556898 IDEP14735 1019 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 SARSP49591 514 aaKnown RBP5.87□□□□□ -1.47
ATXN3-244ENST00000556898 GJA9P57773 515 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 ASIC1P78348 528 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 ZNF200P98182 395 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-244ENST00000556898 DRP2Q13474 957 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 GIT2Q14161 759 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 TRIP4Q15650 581 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-244ENST00000556898 FSCN1Q16658 493 aaKnown RBP5.87□□□□□ -1.47
ATXN3-244ENST00000556898 TMEM31Q5JXX7 168 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 FAM160B1Q5W0V3 765 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 ELMSAN1Q6PJG2 1045 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 IGF2-ASQ6U949 168 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 PRR23CQ6ZRP0 262 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 C11orf57Q6ZUT1 292 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-244ENST00000556898 C1orf186Q6ZWK4 172 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 DAW1Q8N136 415 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 TMEM199Q8N511 208 aa5.87□□□□□ -1.47
ATXN3-244ENST00000556898 PPTC7Q8NI37 304 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms