RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 FSCN2O14926 492 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 HARSP12081 509 aaKnown RBP11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 KCNE1P15382 129 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 DNAJB1P25685 340 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 PBX3P40426 434 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 AFMP43652 599 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 OR1G1P47890 313 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 AFF1P51825 1210 aaKnown RBP11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 CAMK1Q14012 370 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 HSP90AA2PQ14568 343 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 SKIV2LQ15477 1246 aaKnown RBP11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 CCDC85BQ15834 202 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 ZC2HC1CQ53FD0 456 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 FAM26FQ5R3K3 315 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 KANK3Q6NY19 840 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 ALKAL1Q6UXT8 129 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 SYCP3Q8IZU3 236 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 MICAL1Q8TDZ2 1067 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 PPM1EQ8WY54 764 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 CCDC47Q96A33 483 aaKnown RBP11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 PAGE5Q96GU1 130 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 ZBTB45Q96K62 511 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 UROC1Q96N76 676 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 CDCA3Q99618 268 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 ENTPD7Q9NQZ7 604 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 MIOSQ9NXC5 875 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 CNTN3Q9P232 1028 aa11.53□□□□□ -0.56
MTHFD1-214ENST00000556771 CHD7Q9P2D1 2997 aa11.52□□□□□ -0.56
MTHFD1-214ENST00000556771 NT5C1B-RDH14C9J2C7 533 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 KIAA0391O15091 583 aaKnown RBP11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 B4GALT3O60512 393 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 ZNF202O95125 648 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 GARTP22102 1010 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 OSTNP61366 133 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 SNRPFP62306 86 aaKnown RBP11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 EHHADHQ08426 723 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 PSMD2Q13200 908 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 SMC1AQ14683 1233 aaKnown RBP11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 COL19A1Q14993 1142 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 AAK1Q2M2I8 961 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 TCEAL5Q5H9L2 206 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 SLC39A4Q6P5W5 647 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 TMC7Q7Z402 723 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 CD302Q8IX05 232 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 GPR65Q8IYL9 337 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 CEP120Q8N960 986 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 HLA-CQ95604 372 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 DDX27Q96GQ7 796 aaKnown RBP11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 PPP1R10Q96QC0 940 aaKnown RBP11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 TCF25Q9BQ70 676 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 MSTO1Q9BUK6 570 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 EXOC1Q9NV70 894 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 TBC1D7Q9P0N9 293 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 THEGQ9P2T0 379 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 SSX2IPQ9Y2D8 614 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 IRAK3Q9Y616 596 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 MYO7AQ13402 2215 aa11.52□□□□□ -0.57
MTHFD1-214ENST00000556771 ATG2AQ2TAZ0 1938 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 SMIM28A0A1B0GU29 152 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 TMEM189-UBE2V1I3L0A0 370 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 XPOTO43592 962 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 FAM189A1O60320 539 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 LDHAP00338 332 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 ADRB2P07550 413 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 MYBP10242 640 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 CTSAP10619 480 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 CASP5P51878 434 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 ERVFC1P60507 584 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 PPP2R3AQ06190 1150 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 ELAVL2Q12926 359 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 CUL4BQ13620 913 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 NAB2Q15742 525 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 KRBA2Q6ZNG9 492 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 TMEM173Q86WV6 379 aaPredicted RBP11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 VPS52Q8N1B4 723 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 ATXN2LQ8WWM7 1075 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 POMGNT1Q8WZA1 660 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 PABPC5Q96DU9 382 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 HERC2P3Q9BVR0 1158 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 HAPLN2Q9GZV7 340 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 ZBP1Q9H171 429 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 BLZF1Q9H2G9 400 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 GOLPH3LQ9H4A5 285 aa11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 RPF1Q9H9Y2 349 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 HOOK1Q9UJC3 728 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 AGO2Q9UKV8 859 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 PRG3Q9Y2Y8 225 aaPredicted RBP11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 SF3B1O75533 1304 aaKnown RBP eCLIP11.51□□□□□ -0.57
MTHFD1-214ENST00000556771 TTC26A0AVF1 554 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 ANKRD63C9JTQ0 380 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 TADA2AO75478 443 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 SOD2P04179 222 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 SRGAP2BP0DMP2 458 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 CXCL8P10145 99 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 RPL9P32969 192 aaKnown RBP11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 IRS1P35568 1242 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 CREMQ03060 361 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 FAM160A1Q05DH4 1040 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 BMT2Q1RMZ1 405 aa11.5□□□□□ -0.57
MTHFD1-214ENST00000556771 SLC10A6Q3KNW5 377 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms