RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 COL4A3Q01955 1670 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 KLRG2A4D1S0 409 aaPredicted RBP6.87□□□□□ -1.31
VRK1-205ENST00000555402 AP1G1O43747 822 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 PEX14O75381 377 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 OFD1O75665 1012 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 LPOP22079 712 aaPredicted RBP6.87□□□□□ -1.31
VRK1-205ENST00000555402 XPAP23025 273 aaPredicted RBP6.87□□□□□ -1.31
VRK1-205ENST00000555402 AKAP5P24588 427 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 SLC16A1P53985 500 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 ADKP55263 362 aaKnown RBP6.87□□□□□ -1.31
VRK1-205ENST00000555402 COLEC12Q5KU26 742 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 DGKHQ86XP1 1220 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 CDYL2Q8N8U2 506 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 PROKR1Q8TCW9 393 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 HIST1H2AHQ96KK5 128 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 MNTQ99583 582 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 HIST1H2AJQ99878 128 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 SAP30BPQ9UHR5 308 aaKnown RBP6.87□□□□□ -1.31
VRK1-205ENST00000555402 DENND2AQ9ULE3 1009 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 SYNPO2Q9UMS6 1093 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 FZD1Q9UP38 647 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 PCDHB6Q9Y5E3 794 aa6.87□□□□□ -1.31
VRK1-205ENST00000555402 ERC2O15083 957 aa6.86□□□□□ -1.31
VRK1-205ENST00000555402 OPHN1O60890 802 aa6.86□□□□□ -1.31
VRK1-205ENST00000555402 MAFO75444 373 aaPredicted RBP6.86□□□□□ -1.31
VRK1-205ENST00000555402 SESN2P58004 480 aaPredicted RBP6.86□□□□□ -1.31
VRK1-205ENST00000555402 ADAM8P78325 824 aa6.86□□□□□ -1.31
VRK1-205ENST00000555402 MAP3K12Q12852 859 aa6.86□□□□□ -1.31
VRK1-205ENST00000555402 CATIPQ7Z7H3 387 aa6.86□□□□□ -1.31
VRK1-205ENST00000555402 ADGRG3Q86Y34 549 aa6.86□□□□□ -1.31
VRK1-205ENST00000555402 LYSMD2Q8IV50 215 aa6.86□□□□□ -1.31
VRK1-205ENST00000555402 TSPEARQ8WU66 669 aa6.86□□□□□ -1.31
VRK1-205ENST00000555402 KCMF1Q9P0J7 381 aa6.86□□□□□ -1.31
VRK1-205ENST00000555402 TUBD1Q9UJT1 453 aa6.86□□□□□ -1.31
VRK1-205ENST00000555402 DNM3Q9UQ16 869 aa6.86□□□□□ -1.31
VRK1-205ENST00000555402 CDY2AQ9Y6F7 541 aa6.86□□□□□ -1.31
VRK1-205ENST00000555402 UBE2QL1A1L167 161 aa6.85□□□□□ -1.31
VRK1-205ENST00000555402 GRID2IPA4D2P6 1211 aa6.85□□□□□ -1.31
VRK1-205ENST00000555402 C2orf78A6NCI8 922 aa6.85□□□□□ -1.31
VRK1-205ENST00000555402 ABHD16AO95870 558 aa6.85□□□□□ -1.31
VRK1-205ENST00000555402 ZNF37AP17032 561 aaPredicted RBP6.85□□□□□ -1.31
VRK1-205ENST00000555402 NR4A1P22736 598 aa6.85□□□□□ -1.31
VRK1-205ENST00000555402 BPIFB4P59827 614 aa6.85□□□□□ -1.31
VRK1-205ENST00000555402 ZNF267Q14586 743 aaPredicted RBP6.85□□□□□ -1.31
VRK1-205ENST00000555402 HTR3DQ70Z44 454 aa6.85□□□□□ -1.31
VRK1-205ENST00000555402 ANKRD53Q8N9V6 530 aa6.85□□□□□ -1.31
VRK1-205ENST00000555402 FATE1Q969F0 183 aa6.85□□□□□ -1.31
VRK1-205ENST00000555402 ARNT2Q9HBZ2 717 aa6.85□□□□□ -1.31
VRK1-205ENST00000555402 RBM8AQ9Y5S9 174 aaKnown RBP6.85□□□□□ -1.31
VRK1-205ENST00000555402 FRMPD2Q68DX3 1309 aaPredicted RBP6.84□□□□□ -1.31
VRK1-205ENST00000555402 A0A0A6YYJ9 748 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 GOLGA6L6A8MZA4 724 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 NRP2O60462 931 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 CTNND1O60716 968 aaKnown RBP6.84□□□□□ -1.31
VRK1-205ENST00000555402 ITGB1P05556 798 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 POU2F2P09086 479 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 CD38P28907 300 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 GPR15P49685 360 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 DGKDQ16760 1214 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 ANO4Q32M45 955 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 FKBP15Q5T1M5 1219 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 GRAMD1CQ8IYS0 662 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 SLC35G2Q8TBE7 412 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 ATXN2LQ8WWM7 1075 aaKnown RBP6.84□□□□□ -1.31
VRK1-205ENST00000555402 GCDHQ92947 438 aaPredicted RBP6.84□□□□□ -1.31
VRK1-205ENST00000555402 GFM2Q969S9 779 aaKnown RBP6.84□□□□□ -1.31
VRK1-205ENST00000555402 COA7Q96BR5 231 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 TIFAQ96CG3 184 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 PGBD4Q96DM1 585 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 MAP3K14Q99558 947 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 TCF25Q9BQ70 676 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 PITHD1Q9GZP4 211 aaPredicted RBP6.84□□□□□ -1.31
VRK1-205ENST00000555402 TOR3AQ9H497 397 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 EVLQ9UI08 416 aaPredicted RBP6.84□□□□□ -1.31
VRK1-205ENST00000555402 MAGEL2Q9UJ55 1249 aa6.84□□□□□ -1.31
VRK1-205ENST00000555402 KRTAP29-1A8MX34 341 aaPredicted RBP6.83□□□□□ -1.32
VRK1-205ENST00000555402 NRG3P56975 720 aa6.83□□□□□ -1.32
VRK1-205ENST00000555402 MALLQ13021 153 aa6.83□□□□□ -1.32
VRK1-205ENST00000555402 HDAC1Q13547 482 aaPredicted RBP6.83□□□□□ -1.32
VRK1-205ENST00000555402 MUM1L1Q5H9M0 696 aa6.83□□□□□ -1.32
VRK1-205ENST00000555402 STRIP1Q5VSL9 837 aa6.83□□□□□ -1.32
VRK1-205ENST00000555402 OLFML1Q6UWY5 402 aa6.83□□□□□ -1.32
VRK1-205ENST00000555402 SLC41A1Q8IVJ1 513 aa6.83□□□□□ -1.32
VRK1-205ENST00000555402 ELOA2Q8IYF1 753 aaPredicted RBP6.83□□□□□ -1.32
VRK1-205ENST00000555402 OR5AN1Q8NGI8 311 aa6.83□□□□□ -1.32
VRK1-205ENST00000555402 PSMD1Q99460 953 aa6.83□□□□□ -1.32
VRK1-205ENST00000555402 ADI1Q9BV57 179 aa6.83□□□□□ -1.32
VRK1-205ENST00000555402 GTPBP4Q9BZE4 634 aaKnown RBP6.83□□□□□ -1.32
VRK1-205ENST00000555402 SYNPO2LQ9H987 977 aa6.83□□□□□ -1.32
VRK1-205ENST00000555402 SAE1Q9UBE0 346 aaPredicted RBP6.83□□□□□ -1.32
VRK1-205ENST00000555402 SERPINB13Q9UIV8 391 aa6.83□□□□□ -1.32
VRK1-205ENST00000555402 HS3ST4Q9Y661 456 aa6.83□□□□□ -1.32
VRK1-205ENST00000555402 GRXCR1A8MXD5 290 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 B3GALT2O43825 422 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 DTNBO60941 627 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 MFAP3LO75121 409 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 PDCP20941 246 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 GRM3Q14832 879 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 ADRM1Q16186 407 aa6.82□□□□□ -1.32
VRK1-205ENST00000555402 CCDC178Q5BJE1 867 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms