RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 USP6NLQ92738 828 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 STMN2Q93045 179 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 CCDC124Q96CT7 223 aaKnown RBP9.47□□□□□ -0.89
SYNE2-217ENST00000555022 FAM161BQ96MY7 647 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 P2RX7Q99572 595 aaKnown RBP9.47□□□□□ -0.89
SYNE2-217ENST00000555022 TRABDQ9H4I3 376 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 SMYD3Q9H7B4 428 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 ARL8BQ9NVJ2 186 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 BZW2Q9Y6E2 419 aaKnown RBP9.47□□□□□ -0.89
SYNE2-217ENST00000555022 FAM187AA6NFU0 413 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 TGFB1I1O43294 461 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 FGRP09769 529 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 PYGBP11216 843 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 AMPD1P23109 780 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 NRLP54845 237 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 IL9RQ01113 521 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.47□□□□□ -0.89
SYNE2-217ENST00000555022 NLRP9Q7RTR0 991 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 LRRC6Q86X45 466 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 CCDC125Q86Z20 511 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 CFAP61Q8NHU2 1237 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 FBXO27Q8NI29 283 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 LRRN4Q8WUT4 740 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 EZH1Q92800 747 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-217ENST00000555022 ABTB1Q969K4 478 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-217ENST00000555022 TTC17Q96AE7 1141 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 MIPEPQ99797 713 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 SPZ1Q9BXG8 430 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 ANO3Q9BYT9 981 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 ZNF395Q9H8N7 513 aaPredicted RBP9.47□□□□□ -0.89
SYNE2-217ENST00000555022 SCOCQ9UIL1 159 aa9.47□□□□□ -0.89
SYNE2-217ENST00000555022 LOC102724428A0A0B4J2F2 783 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 A6NHS1 94 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 SIK1P57059 783 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 STRN3Q13033 797 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 DHX34Q14147 1143 aaKnown RBP9.46□□□□□ -0.89
SYNE2-217ENST00000555022 SLMAPQ14BN4 828 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 NKX1-1Q15270 411 aaPredicted RBP9.46□□□□□ -0.89
SYNE2-217ENST00000555022 GALNT17Q6IS24 598 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 DPY19L2P1Q6NXN4 242 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 LVRNQ6Q4G3 990 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 PTF1AQ7RTS3 328 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 FBXO33Q7Z6M2 555 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 KBTBD2Q8IY47 623 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 SEC14L1Q92503 715 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 NMD3Q96D46 503 aaKnown RBP9.46□□□□□ -0.89
SYNE2-217ENST00000555022 KIFC3Q9BVG8 833 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 LRRC27Q9C0I9 530 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 SAE1Q9UBE0 346 aaPredicted RBP9.46□□□□□ -0.89
SYNE2-217ENST00000555022 RABGAP1Q9Y3P9 1069 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 PITPNM2Q9BZ72 1349 aa9.46□□□□□ -0.89
SYNE2-217ENST00000555022 NUP188Q5SRE5 1749 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 OAS1P00973 400 aaKnown RBP9.46□□□□□ -0.9
SYNE2-217ENST00000555022 ENO1P06733 434 aaKnown RBP9.46□□□□□ -0.9
SYNE2-217ENST00000555022 RPL13P26373 211 aaKnown RBP9.46□□□□□ -0.9
SYNE2-217ENST00000555022 POLGP54098 1239 aaPredicted RBP9.46□□□□□ -0.9
SYNE2-217ENST00000555022 SLC12A3P55017 1021 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 QRICH1Q2TAL8 776 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 P3H1Q32P28 736 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 ASRGL1Q7L266 308 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 HS2ST1Q7LGA3 356 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 NOP9Q86U38 636 aaKnown RBP9.46□□□□□ -0.9
SYNE2-217ENST00000555022 FAM178BQ8IXR5 827 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 ERLEC1Q96DZ1 483 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 MOV10L1Q9BXT6 1211 aaKnown RBP9.46□□□□□ -0.9
SYNE2-217ENST00000555022 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.46□□□□□ -0.9
SYNE2-217ENST00000555022 ZNF219Q9P2Y4 722 aaPredicted RBP9.46□□□□□ -0.9
SYNE2-217ENST00000555022 FRMD4BQ9Y2L6 1034 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 GLI3P10071 1580 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 KLHL33A6NCF5 533 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 SRRM3A6NNA2 597 aaPredicted RBP9.46□□□□□ -0.9
SYNE2-217ENST00000555022 GYG2O15488 501 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 GDF11O95390 407 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 T-ENOLP0DO92 83 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 RALAP11233 206 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 ALADP13716 330 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 ATP6V1C1P21283 382 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 ALDH3A1P30838 453 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 MTFR1Q15390 333 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 ACSBG2Q5FVE4 666 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 MFSD14BQ5SR56 506 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 OLFML2BQ68BL8 750 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 ARHGEF18Q6ZSZ5 1173 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 ZBED8Q8IZ13 594 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 KIFAP3Q92845 792 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 RBM15Q96T37 977 aaKnown RBP eCLIP9.46□□□□□ -0.9
SYNE2-217ENST00000555022 CBWD1Q9BRT8 395 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 FHDC1Q9C0D6 1143 aaPredicted RBP9.46□□□□□ -0.9
SYNE2-217ENST00000555022 TMEM117Q9H0C3 514 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 BSDC1Q9NW68 430 aaPredicted RBP9.46□□□□□ -0.9
SYNE2-217ENST00000555022 HEY2Q9UBP5 337 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 AK5Q9Y6K8 562 aa9.46□□□□□ -0.9
SYNE2-217ENST00000555022 E2F8A0AVK6 867 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 FAM47DPA6NHR8 397 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 FAM86B1E9PN63 330 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 F5H423 210 aaPredicted RBP9.45□□□□□ -0.9
SYNE2-217ENST00000555022 C6orf229H3BNL8 230 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 MAPK13O15264 365 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 TTC4O95801 387 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 CFBP00751 764 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms