RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CEP95Q96GE4 821 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 ZNF341Q9BYN7 854 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 EPC1Q9H2F5 836 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 TCF7L1Q9HCS4 588 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 DNM3Q9UQ16 869 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 IPPQ9Y573 584 aa4.06□□□□□ -1.76
SCFD1-213ENST00000554776 ATRNL1Q5VV63 1379 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 CCDC194A0A1B0GVG4 234 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 B5MCH6 92 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 NPIPB8E9PQR5 432 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 HTRA2O43464 458 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-213ENST00000554776 ENDOD1O94919 500 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 ACVRL1P37023 503 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 GNALP38405 381 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 SLC16A1P53985 500 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 ADKP55263 362 aaKnown RBP4.05□□□□□ -1.76
SCFD1-213ENST00000554776 SLC25A3Q00325 362 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 KIF23Q02241 960 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-213ENST00000554776 TUBA3CQ13748 450 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 VPS72Q15906 364 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 CSRP2Q16527 193 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 LSM12Q3MHD2 195 aaKnown RBP4.05□□□□□ -1.76
SCFD1-213ENST00000554776 RABL3Q5HYI8 236 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 MFSD14BQ5SR56 506 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 TUBA3EQ6PEY2 450 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 FAM180AQ6UWF9 173 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 PDZD4Q76G19 769 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-213ENST00000554776 XYLT1Q86Y38 959 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 PQLC1Q8N2U9 271 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 DPF2Q92785 391 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 COA7Q96BR5 231 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 HSPBAP1Q96EW2 488 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 CCDC136Q96JN2 1154 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 CSRNP2Q9H175 543 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 KCNH6Q9H252 994 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 TMPRSS5Q9H3S3 457 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 ANLNQ9NQW6 1124 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 LANCL2Q9NS86 450 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 INTUQ9ULD6 942 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 LIMCH1Q9UPQ0 1083 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 CLCA2Q9UQC9 943 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 ANKRD6Q9Y2G4 727 aa4.05□□□□□ -1.76
SCFD1-213ENST00000554776 VSTM5A8MXK1 200 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 PRR5-ARHGAP8B1AHC4 643 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 NARSO43776 548 aaKnown RBP4.04□□□□□ -1.76
SCFD1-213ENST00000554776 RFPL1O75677 317 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 ALOX15P16050 662 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-213ENST00000554776 GDF5P43026 501 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 FLT3LGP49771 235 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 SP140Q13342 867 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 C3orf36Q3SXR2 165 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 MAP9Q49MG5 647 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 FAM47AQ5JRC9 791 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 FNDC7Q5VTL7 733 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 ANKS6Q68DC2 871 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 IGFL4Q6B9Z1 124 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 DRICH1Q6PGQ1 229 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-213ENST00000554776 SLC4A10Q6U841 1118 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 TCEAL8Q8IYN2 117 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 MAGEB6Q8N7X4 407 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 SLC16A11Q8NCK7 471 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 FBXO18Q8NFZ0 1043 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 CLIP3Q96DZ5 547 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 NDC1Q9BTX1 674 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 KRTAP17-1Q9BYP8 105 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 LDAHQ9H6V9 325 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 SAP30BPQ9UHR5 308 aaKnown RBP4.04□□□□□ -1.76
SCFD1-213ENST00000554776 HDAC5Q9UQL6 1122 aa4.04□□□□□ -1.76
SCFD1-213ENST00000554776 CCDC154A6NI56 674 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 TBKBP1A7MCY6 615 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 CYR61O00622 381 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 TRIM24O15164 1050 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 PJA2O43164 708 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 AP1G1O43747 822 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 AKAP8O43823 692 aaKnown RBP4.03□□□□□ -1.76
SCFD1-213ENST00000554776 PEX14O75381 377 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 ZNF202O95125 648 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 FSHBP01225 129 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 AMY1AP04745 511 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 FPR1P21462 350 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 PCSK1P29120 753 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 PTPN7P35236 360 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 FXR1P51114 621 aaKnown RBP eCLIP4.03□□□□□ -1.76
SCFD1-213ENST00000554776 PER3P56645 1201 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 ATP8B2P98198 1209 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 MTM1Q13496 603 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 ZNF267Q14586 743 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-213ENST00000554776 BMT2Q1RMZ1 405 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 NXNQ6DKJ4 435 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 KSR2Q6VAB6 950 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 USP51Q70EK9 711 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 MIGA2Q7L4E1 593 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 EPM2AIP1Q7L775 607 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-213ENST00000554776 CATIPQ7Z7H3 387 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 ZGPATQ8N5A5 531 aaKnown RBP4.03□□□□□ -1.76
SCFD1-213ENST00000554776 SLC35B2Q8TB61 432 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 CASKIN2Q8WXE0 1202 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 HDAC10Q969S8 669 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 TIFAQ96CG3 184 aa4.03□□□□□ -1.76
SCFD1-213ENST00000554776 CYFIP2Q96F07 1278 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms