RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 COPRSQ9NQ92 184 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 GPR160Q9UJ42 338 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 RCAN3Q9UKA8 241 aa6.75□□□□□ -1.33
ATXN3-226ENST00000554350 TRIP12Q14669 1992 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-226ENST00000554350 DMDP11532 3685 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 ZFYVE26Q68DK2 2539 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 TEX51A0A1B0GUA7 166 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 TMEM82A0PJX8 343 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 MINDY4BA8MYZ0 360 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 WDR46O15213 610 aaKnown RBP6.74□□□□□ -1.33
ATXN3-226ENST00000554350 NBNO60934 754 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 TIMM10P62072 90 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 COASYQ13057 564 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 DUSP4Q13115 394 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 NMIQ13287 307 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-226ENST00000554350 MVPQ14764 893 aaKnown RBP6.74□□□□□ -1.33
ATXN3-226ENST00000554350 PTGISQ16647 500 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 TMEM63BQ5T3F8 832 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 FBXL19Q6PCT2 694 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 TMC3Q7Z5M5 1100 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 SPPL2CQ8IUH8 684 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 CCDC105Q8IYK2 499 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 PHACTR4Q8IZ21 702 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 CAGE1Q8TC20 777 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 RTKNQ9BST9 563 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 SGPP1Q9BX95 441 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 SMOC2Q9H3U7 446 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 SH2D4AQ9H788 454 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 PDGFCQ9NRA1 345 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 HOMER2Q9NSB8 354 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 KBTBD4Q9NVX7 518 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 HMG20BQ9P0W2 317 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 CLEC1BQ9P126 229 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 ANGPTL2Q9UKU9 493 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 ZNF214Q9UL59 606 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-226ENST00000554350 SORCS3Q9UPU3 1222 aa6.74□□□□□ -1.33
ATXN3-226ENST00000554350 PRRG2O14669 202 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 PI15O43692 258 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 GREM1O60565 184 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 PARNO95453 639 aaKnown RBP6.73□□□□□ -1.33
ATXN3-226ENST00000554350 SHMT1P34896 483 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 NRIP1P48552 1158 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 CPT1AP50416 773 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 DYNLL1P63167 89 aaKnown RBP6.73□□□□□ -1.33
ATXN3-226ENST00000554350 HTRA4P83105 476 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-226ENST00000554350 PURAQ00577 322 aaKnown RBP6.73□□□□□ -1.33
ATXN3-226ENST00000554350 CNTN2Q02246 1040 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 ICA1Q05084 483 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 SNW1Q13573 536 aaKnown RBP6.73□□□□□ -1.33
ATXN3-226ENST00000554350 BRDTQ58F21 947 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-226ENST00000554350 ARSHQ5FYA8 562 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 IQSEC1Q6DN90 963 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 NFRKBQ6P4R8 1299 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 RNF111Q6ZNA4 994 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 FBXO16Q8IX29 292 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-226ENST00000554350 TRMT2AQ8IZ69 625 aaKnown RBP6.73□□□□□ -1.33
ATXN3-226ENST00000554350 FIBCD1Q8N539 461 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 FAM133AQ8N9E0 248 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 OR6J1Q8NGC5 347 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 ENOX1Q8TC92 643 aaKnown RBP6.73□□□□□ -1.33
ATXN3-226ENST00000554350 NEUROD6Q96NK8 337 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 APOL5Q9BWW9 433 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 KATNBL1Q9H079 304 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 LMAN2LQ9H0V9 348 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 VCPKMTQ9H867 229 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 VTI1BQ9UEU0 232 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 USP18Q9UMW8 372 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 RIPK3Q9Y572 518 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 DDX49Q9Y6V7 483 aaKnown RBP6.73□□□□□ -1.33
ATXN3-226ENST00000554350 MYH1P12882 1939 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 OTOGLQ3ZCN5 2332 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 UNC79Q9P2D8 2635 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 NLRC5Q86WI3 1866 aa6.73□□□□□ -1.33
ATXN3-226ENST00000554350 ATG2AQ2TAZ0 1938 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 ASB14A6NK59 587 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 PRR5-ARHGAP8B1AHC4 643 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 CIAO1O76071 339 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 ATE1O95260 518 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 CXCL10P02778 98 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 ATF7P17544 494 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-226ENST00000554350 HOXA5P20719 270 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 POLR2BP30876 1174 aaKnown RBP6.72□□□□□ -1.33
ATXN3-226ENST00000554350 RFX5P48382 616 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-226ENST00000554350 ARHGAP8P85298 464 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 ZNF200P98182 395 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-226ENST00000554350 PWP1Q13610 501 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 GPNMBQ14956 572 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 CLEC16AQ2KHT3 1053 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 BBS9Q3SYG4 887 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 FAM83BQ5T0W9 1011 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 ADGRD2Q7Z7M1 963 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 EFHBQ8N7U6 833 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 DAGLBQ8NCG7 672 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 SECISBP2LQ93073 1101 aaKnown RBP6.72□□□□□ -1.33
ATXN3-226ENST00000554350 TCTN2Q96GX1 697 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 CCDC136Q96JN2 1154 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 FGD4Q96M96 766 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 RTP3Q9BQQ7 232 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 FOXP3Q9BZS1 431 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 BRMS1Q9HCU9 246 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms