RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 KCNH6Q9H252 994 aa6.6□□□□□ -1.35
FOXN3-206ENST00000554005 PARD6AQ9NPB6 346 aa6.6□□□□□ -1.35
FOXN3-206ENST00000554005 NR2E3Q9Y5X4 410 aa6.6□□□□□ -1.35
FOXN3-206ENST00000554005 TOP2BQ02880 1626 aa6.6□□□□□ -1.35
FOXN3-206ENST00000554005 BIVM-ERCC5R4GMW8 1640 aa6.6□□□□□ -1.35
FOXN3-206ENST00000554005 SYNJ1O43426 1573 aa6.6□□□□□ -1.35
FOXN3-206ENST00000554005 EIF4G3O43432 1585 aaKnown RBP6.6□□□□□ -1.35
FOXN3-206ENST00000554005 IFT140Q96RY7 1462 aa6.6□□□□□ -1.35
FOXN3-206ENST00000554005 ZNF536O15090 1300 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 HOXA3O43365 443 aaPredicted RBP6.59□□□□□ -1.35
FOXN3-206ENST00000554005 EIF5BO60841 1220 aaKnown RBP6.59□□□□□ -1.35
FOXN3-206ENST00000554005 CAND2O75155 1236 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 PLATP00750 562 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 HTR1BP28222 390 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 RPS19P39019 145 aaKnown RBP6.59□□□□□ -1.35
FOXN3-206ENST00000554005 IL12RB1P42701 662 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 HK3P52790 923 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 USP14P54578 494 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 ZNF280AP59817 542 aaPredicted RBP6.59□□□□□ -1.35
FOXN3-206ENST00000554005 KHDC1Q4VXA5 237 aaKnown RBP6.59□□□□□ -1.35
FOXN3-206ENST00000554005 FAM47AQ5JRC9 791 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 ZFYVE27Q5T4F4 411 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 AFMIDQ63HM1 303 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 CCSAPQ6IQ19 270 aaPredicted RBP6.59□□□□□ -1.35
FOXN3-206ENST00000554005 SLC4A10Q6U841 1118 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 CHST15Q7LFX5 561 aaPredicted RBP6.59□□□□□ -1.35
FOXN3-206ENST00000554005 CCDC146Q8IYE0 955 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 C3orf20Q8ND61 904 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 GIMAP8Q8ND71 665 aaPredicted RBP6.59□□□□□ -1.35
FOXN3-206ENST00000554005 TMEM176AQ96HP8 235 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 ZNF512Q96ME7 567 aaPredicted RBP6.59□□□□□ -1.35
FOXN3-206ENST00000554005 OR14A2Q96R54 314 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 VRK1Q99986 396 aaPredicted RBP6.59□□□□□ -1.35
FOXN3-206ENST00000554005 MOCS1Q9NZB8 636 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 CALCOCO1Q9P1Z2 691 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 STXBP5LQ9Y2K9 1186 aa6.59□□□□□ -1.35
FOXN3-206ENST00000554005 NPEPPSL1A6NEC2 478 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 PRICKLE3O43900 615 aaPredicted RBP6.58□□□□□ -1.36
FOXN3-206ENST00000554005 CTXN1P60606 82 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 JAG1P78504 1218 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 GRM7Q14831 915 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 UBXN11Q5T124 520 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 TCTN3Q6NUS6 607 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 GADL1Q6ZQY3 521 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 DCBLD1Q8N8Z6 715 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 KLHDC4Q8TBB5 520 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 BORCS6Q96GS4 357 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 B3GNT5Q9BYG0 378 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 TMEM60Q9H2L4 133 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 FAM204AQ9H8W3 233 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 PLA2G3Q9NZ20 509 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 POLHQ9Y253 713 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 RUVBL1Q9Y265 456 aaKnown RBP6.58□□□□□ -1.36
FOXN3-206ENST00000554005 PCDHA3Q9Y5H8 950 aa6.58□□□□□ -1.36
FOXN3-206ENST00000554005 CCDC194A0A1B0GVG4 234 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 CXorf49A8MYA2 514 aaPredicted RBP6.57□□□□□ -1.36
FOXN3-206ENST00000554005 FAM227AF5H4B4 570 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 GPR42O15529 346 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 TEX33O43247 280 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 RAD17O75943 681 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 KRT18P05783 430 aaKnown RBP6.57□□□□□ -1.36
FOXN3-206ENST00000554005 RAP2AP10114 183 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 MALP21145 153 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 AGFG1P52594 562 aaKnown RBP6.57□□□□□ -1.36
FOXN3-206ENST00000554005 LLGL1Q15334 1064 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 FKBP15Q5T1M5 1219 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 HEATR3Q7Z4Q2 680 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 PLXDC1Q8IUK5 500 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 KIAA0319LQ8IZA0 1049 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 FUKQ8N0W3 1084 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 PLBD2Q8NHP8 589 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 SLC35B2Q8TB61 432 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 CDK5RAP3Q96JB5 506 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 TEPSINQ96N21 525 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 PCGF6Q9BYE7 350 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 EPC1Q9H2F5 836 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 ARNT2Q9HBZ2 717 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 SLC23A1Q9UHI7 598 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 SLC30A1Q9Y6M5 507 aa6.57□□□□□ -1.36
FOXN3-206ENST00000554005 POLA1P09884 1462 aaPredicted RBP6.57□□□□□ -1.36
FOXN3-206ENST00000554005 FGD5Q6ZNL6 1462 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 B5MCH6 92 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 TPP1O14773 563 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 FOXS1O43638 330 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 ARIH2O95376 493 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 SNAPC2Q13487 334 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 ANO6Q4KMQ2 910 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 CCDC157Q569K6 752 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 ANKS6Q68DC2 871 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 OTUD7BQ6GQQ9 843 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 NPNTQ6UXI9 565 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 LIMS2Q7Z4I7 341 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 SRGAP1Q7Z6B7 1085 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 CIR1Q86X95 450 aaPredicted RBP6.56□□□□□ -1.36
FOXN3-206ENST00000554005 MYOCQ99972 504 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 SSBP3Q9BWW4 388 aaPredicted RBP6.56□□□□□ -1.36
FOXN3-206ENST00000554005 LSM14BQ9BX40 385 aaKnown RBP6.56□□□□□ -1.36
FOXN3-206ENST00000554005 GOLGA2P5Q9HBQ8 144 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 LMBRD1Q9NUN5 540 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 ZFR2Q9UPR6 939 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms