RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 WNT8AQ9H1J5 351 aa3.48□□□□□ -1.85
SRP54-204ENST00000553923 A0A1B0GTW7 788 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 WDR91A4D1P6 747 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 E9PSI1 815 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 ADCY6O43306 1168 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 ZFPL1O95159 310 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 CELA2AP08217 269 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 CXADRP78310 365 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 MRPS35P82673 323 aaKnown RBP3.47□□□□□ -1.85
SRP54-204ENST00000553923 TERF2Q15554 542 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 CYP2A13Q16696 494 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 SPDYE7PQ495Y7 208 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 KIAA0895LQ68EN5 471 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 PDZD4Q76G19 769 aaPredicted RBP3.47□□□□□ -1.85
SRP54-204ENST00000553923 ZNF572Q7Z3I7 529 aaPredicted RBP3.47□□□□□ -1.85
SRP54-204ENST00000553923 PASD1Q8IV76 773 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 FAM43AQ8N2R8 423 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 LNX2Q8N448 690 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 OR14C36Q8NHC7 312 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 ASB6Q9NWX5 421 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 THG1LQ9NWX6 298 aaKnown RBP3.47□□□□□ -1.85
SRP54-204ENST00000553923 FAM30AQ9NZY2 134 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 LRIT1Q9P2V4 623 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 CDY2AQ9Y6F7 541 aa3.47□□□□□ -1.85
SRP54-204ENST00000553923 GAS7O60861 476 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 PRSS23O95084 383 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 FGFR4P22455 802 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 GCSHP23434 173 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 SSBP2P81877 361 aaPredicted RBP3.46□□□□□ -1.86
SRP54-204ENST00000553923 PABPC4Q13310 644 aaKnown RBP eCLIP3.46□□□□□ -1.86
SRP54-204ENST00000553923 PITRM1Q5JRX3 1037 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 MED25Q71SY5 747 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 SMC1BQ8NDV3 1235 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 REPS2Q8NFH8 660 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 ACTRT2Q8TDY3 377 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 FUBP3Q96I24 572 aaKnown RBP eCLIP3.46□□□□□ -1.86
SRP54-204ENST00000553923 PHACTR3Q96KR7 559 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 UROC1Q96N76 676 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 AIFM2Q9BRQ8 373 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 ANO3Q9BYT9 981 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 KANSL2Q9H9L4 492 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 UNKLQ9H9P5 680 aaKnown RBP3.46□□□□□ -1.86
SRP54-204ENST00000553923 GALNT9Q9HCQ5 603 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 CASS4Q9NQ75 786 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 IL17RBQ9NRM6 502 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 TBCCD1Q9NVR7 557 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 KCTD5Q9NXV2 234 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 MAGEC2Q9UBF1 373 aaPredicted RBP3.46□□□□□ -1.86
SRP54-204ENST00000553923 NOX1Q9Y5S8 564 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 SHROOM4Q9ULL8 1493 aa3.46□□□□□ -1.86
SRP54-204ENST00000553923 SNRPA1P09661 255 aaKnown RBP3.45□□□□□ -1.86
SRP54-204ENST00000553923 ALOX15P16050 662 aaPredicted RBP3.45□□□□□ -1.86
SRP54-204ENST00000553923 WT1P19544 449 aaPredicted RBP3.45□□□□□ -1.86
SRP54-204ENST00000553923 LSP1P33241 339 aa3.45□□□□□ -1.86
SRP54-204ENST00000553923 TRMT2AQ8IZ69 625 aaKnown RBP3.45□□□□□ -1.86
SRP54-204ENST00000553923 ZNF480Q8WV37 535 aa3.45□□□□□ -1.86
SRP54-204ENST00000553923 RNF31Q96EP0 1072 aa3.45□□□□□ -1.86
SRP54-204ENST00000553923 SPTLC3Q9NUV7 552 aa3.45□□□□□ -1.86
SRP54-204ENST00000553923 USP35Q9P2H5 1018 aa3.45□□□□□ -1.86
SRP54-204ENST00000553923 KCNE5Q9UJ90 142 aa3.45□□□□□ -1.86
SRP54-204ENST00000553923 RPTORQ8N122 1335 aa3.44□□□□□ -1.86
SRP54-204ENST00000553923 AATKQ6ZMQ8 1374 aa3.44□□□□□ -1.86
SRP54-204ENST00000553923 IKBKBO14920 756 aa3.44□□□□□ -1.86
SRP54-204ENST00000553923 KPNA6O60684 536 aa3.44□□□□□ -1.86
SRP54-204ENST00000553923 CANXP27824 592 aaKnown RBP3.44□□□□□ -1.86
SRP54-204ENST00000553923 KPNA1P52294 538 aaPredicted RBP3.44□□□□□ -1.86
SRP54-204ENST00000553923 VAV2P52735 878 aa3.44□□□□□ -1.86
SRP54-204ENST00000553923 MST1LQ2TV78 715 aa3.44□□□□□ -1.86
SRP54-204ENST00000553923 FRMD7Q6ZUT3 714 aa3.44□□□□□ -1.86
SRP54-204ENST00000553923 Q6ZVL8 140 aa3.44□□□□□ -1.86
SRP54-204ENST00000553923 WASF1Q92558 559 aa3.44□□□□□ -1.86
SRP54-204ENST00000553923 RNPEPQ9H4A4 650 aa3.44□□□□□ -1.86
SRP54-204ENST00000553923 SIK3Q9Y2K2 1263 aa3.44□□□□□ -1.86
SRP54-204ENST00000553923 ENTPD2Q9Y5L3 495 aa3.44□□□□□ -1.86
SRP54-204ENST00000553923 AOX1Q06278 1338 aa3.44□□□□□ -1.86
SRP54-204ENST00000553923 ELFN1P0C7U0 828 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 ITPKBP27987 946 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 FOLR3P41439 243 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 HSD11B2P80365 405 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 SP140Q13342 867 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 UBXN2BQ14CS0 331 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 PCBP1Q15365 356 aaKnown RBP eCLIP3.43□□□□□ -1.86
SRP54-204ENST00000553923 SOGA3Q5TF21 947 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 PTF1AQ7RTS3 328 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 Q8NA96 180 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 DDB2Q92466 427 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 SARAFQ96BY9 339 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 PTCD3Q96EY7 689 aaKnown RBP3.43□□□□□ -1.86
SRP54-204ENST00000553923 BRIP1Q9BX63 1249 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 KCTD10Q9H3F6 313 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 TMEM260Q9NX78 707 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 USP25Q9UHP3 1055 aa3.43□□□□□ -1.86
SRP54-204ENST00000553923 PHF2O75151 1096 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 ERN1O75460 977 aaKnown RBP3.42□□□□□ -1.86
SRP54-204ENST00000553923 ASMTLO95671 621 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 GPANK1O95872 356 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 LPLP06858 475 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 POU3F3P20264 500 aaPredicted RBP3.42□□□□□ -1.86
SRP54-204ENST00000553923 SLC6A2P23975 617 aa3.42□□□□□ -1.86
SRP54-204ENST00000553923 PTPN7P35236 360 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms