RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 SSX2IPQ9Y2D8 614 aa10.19□□□□□ -0.78
CHD8-206ENST00000553870 TTC26A0AVF1 554 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 ANKRD63C9JTQ0 380 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 PTGESO14684 152 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 KLRC4O43908 158 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 PRPF6O94906 941 aaKnown RBP10.18□□□□□ -0.78
CHD8-206ENST00000553870 MYBP10242 640 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 CYP3A5P20815 502 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 RPL9P32969 192 aaKnown RBP10.18□□□□□ -0.78
CHD8-206ENST00000553870 OR1G1P47890 313 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 SLC11A1P49279 550 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 CASP5P51878 434 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 OSTNP61366 133 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 UBE2HP62256 183 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 CAMK1Q14012 370 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 KCNB1Q14721 858 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 NAB2Q15742 525 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 BMT2Q1RMZ1 405 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 SLC10A6Q3KNW5 377 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 SLC39A4Q6P5W5 647 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 DCLRE1AQ6PJP8 1040 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 MICAL1Q8TDZ2 1067 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 TMEM174Q8WUU8 243 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 POMGNT1Q8WZA1 660 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 SNX27Q96L92 541 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 PPP1R10Q96QC0 940 aaKnown RBP10.18□□□□□ -0.78
CHD8-206ENST00000553870 HAPLN2Q9GZV7 340 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 GBP3Q9H0R5 595 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 ASB7Q9H672 318 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 RPF1Q9H9Y2 349 aaKnown RBP10.18□□□□□ -0.78
CHD8-206ENST00000553870 KIAA1586Q9HCI6 787 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 TSHZ2Q9NRE2 1034 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 EXOC1Q9NV70 894 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 HCSTQ9UBK5 93 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 DNAJB4Q9UDY4 337 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 CPSF3Q9UKF6 684 aaKnown RBP10.18□□□□□ -0.78
CHD8-206ENST00000553870 COG5Q9UP83 839 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 IRAK3Q9Y616 596 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 NLRC5Q86WI3 1866 aa10.18□□□□□ -0.78
CHD8-206ENST00000553870 CHD9Q3L8U1 2897 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 NT5C1B-RDH14C9J2C7 533 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 FSCN2O14926 492 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 XPOTO43592 962 aaKnown RBP10.17□□□□□ -0.78
CHD8-206ENST00000553870 EXTL3O43909 919 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 FAM189A1O60320 539 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 RHOBTB3O94955 611 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 RPN1P04843 607 aaKnown RBP10.17□□□□□ -0.78
CHD8-206ENST00000553870 CTSAP10619 480 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 HARSP12081 509 aaKnown RBP10.17□□□□□ -0.78
CHD8-206ENST00000553870 PAX3P23760 479 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 DNAJB1P25685 340 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 ADSSP30520 456 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 PPP2R3AQ06190 1150 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 KCNA1Q09470 495 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 DPYDQ12882 1025 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 ELAVL2Q12926 359 aaKnown RBP10.17□□□□□ -0.78
CHD8-206ENST00000553870 KNOP1Q1ED39 458 aaKnown RBP10.17□□□□□ -0.78
CHD8-206ENST00000553870 KMT5BQ4FZB7 885 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 HS2ST1Q7LGA3 356 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 NT5DC4Q86YG4 428 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 GRAMD1CQ8IYS0 662 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 VPS52Q8N1B4 723 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 CEP120Q8N960 986 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 MRPL43Q8N983 215 aaKnown RBP10.17□□□□□ -0.78
CHD8-206ENST00000553870 GOLGA5Q8TBA6 731 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 SCFD1Q8WVM8 642 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 CDCA3Q99618 268 aaPredicted RBP10.17□□□□□ -0.78
CHD8-206ENST00000553870 SLC39A2Q9NP94 309 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 RMND1Q9NWS8 449 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 DERAQ9Y315 318 aa10.17□□□□□ -0.78
CHD8-206ENST00000553870 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.16□□□□□ -0.78
CHD8-206ENST00000553870 LACTBL1A8MY62 500 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 TMEM189-UBE2V1I3L0A0 370 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 B4GALT3O60512 393 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 KINO60870 393 aaKnown RBP10.16□□□□□ -0.78
CHD8-206ENST00000553870 TADA2AO75478 443 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 IL18RAPO95256 599 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 SMC2O95347 1197 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 CXCL14O95715 111 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 EFEMP2O95967 443 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 C1RP00736 705 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 SOD2P04179 222 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 CASP1P29466 404 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 HOXD13P35453 343 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 PBX3P40426 434 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 ERVFC1P60507 584 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 STK4Q13043 487 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 SMC1AQ14683 1233 aaKnown RBP10.16□□□□□ -0.78
CHD8-206ENST00000553870 COL19A1Q14993 1142 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 ZBTB6Q15916 424 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 ENOX2Q16206 610 aaKnown RBP10.16□□□□□ -0.78
CHD8-206ENST00000553870 UPP1Q16831 310 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 TMC7Q7Z402 723 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 C12orf56Q8IXR9 622 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 RNF168Q8IYW5 571 aaPredicted RBP10.16□□□□□ -0.78
CHD8-206ENST00000553870 MICALL1Q8N3F8 863 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 HPS3Q969F9 1004 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 GSDMAQ96QA5 445 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 TCF25Q9BQ70 676 aa10.16□□□□□ -0.78
CHD8-206ENST00000553870 FGFBP2Q9BYJ0 223 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms