RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 KCNK12Q9HB15 430 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 PARVGQ9HBI0 331 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 LMBRD1Q9NUN5 540 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 EXOC1Q9NV70 894 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 LARSQ9P2J5 1176 aaKnown RBP12.5□□□□□ -0.41
TMEM116-218ENST00000552839 KCNG1Q9UIX4 513 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 FBXL21Q9UKT6 434 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 ODF2LQ9ULJ1 636 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 COL4A3BPQ9Y5P4 624 aa12.5□□□□□ -0.41
TMEM116-218ENST00000552839 DOCK8Q8NF50 2099 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 MED19A0JLT2 244 aaPredicted RBP12.49□□□□□ -0.41
TMEM116-218ENST00000552839 H0YCG3 227 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 K7ENM7 598 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 ASAP2O43150 1006 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 MYL1P05976 194 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 GALTP07902 379 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 SRGAP2CP0DJJ0 459 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 GAP43P17677 238 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 PHKA2P46019 1235 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 POSTNQ15063 836 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 CCDC149Q6ZUS6 474 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 STXBP4Q6ZWJ1 553 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 OTOP3Q7RTS5 596 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 GRAMD1CQ8IYS0 662 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 FMR1NBQ8N0W7 255 aaPredicted RBP12.49□□□□□ -0.41
TMEM116-218ENST00000552839 PAGE5Q96GU1 130 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 TIGD1Q96MW7 591 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 VN1R3Q9BXE9 311 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 GCOM2Q9BZD3 368 aaPredicted RBP12.49□□□□□ -0.41
TMEM116-218ENST00000552839 NUP62CLQ9H1M0 184 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 C2orf40Q9H1Z8 148 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 BLZF1Q9H2G9 400 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 SFXN1Q9H9B4 322 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 GPRC5CQ9NQ84 441 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 MYH11P35749 1972 aa12.49□□□□□ -0.41
TMEM116-218ENST00000552839 PHLPP2Q6ZVD8 1323 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 NPHP3-ACAD11A0A0J9YXS1 232 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 MEIS3P2A8K0S8 358 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 NARSO43776 548 aaKnown RBP12.48□□□□□ -0.41
TMEM116-218ENST00000552839 N4BP1O75113 896 aaKnown RBP12.48□□□□□ -0.41
TMEM116-218ENST00000552839 LAMTOR4Q0VGL1 99 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 PTPN14Q15678 1187 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 C1orf186Q6ZWK4 172 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 ZNF410Q86VK4 478 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 RNF149Q8NC42 400 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 PRPF31Q8WWY3 499 aaKnown RBP12.48□□□□□ -0.41
TMEM116-218ENST00000552839 LPPQ93052 612 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 SMARCE1Q969G3 411 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 TRIM9Q9C026 710 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 INO80BQ9C086 356 aaPredicted RBP12.48□□□□□ -0.41
TMEM116-218ENST00000552839 KMT5AQ9NQR1 393 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 XPNPEP1Q9NQW7 623 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 PANK4Q9NVE7 773 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 TBC1D13Q9NVG8 400 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 KBTBD4Q9NVX7 518 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 RMND1Q9NWS8 449 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 DNAJB4Q9UDY4 337 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 GVINP1Q7Z2Y8 2422 aa12.48□□□□□ -0.41
TMEM116-218ENST00000552839 MTCL1Q9Y4B5 1905 aaKnown RBP12.47□□□□□ -0.41
TMEM116-218ENST00000552839 IGKV6-21A0A0C4DH24 114 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 KRBA1A5PL33 1030 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 MYMKA6NI61 221 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 INO80B-WBP1J3KQ70 363 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 ERLIN2O94905 339 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 LMNAP02545 664 aaKnown RBP12.47□□□□□ -0.41
TMEM116-218ENST00000552839 PLS3P13797 630 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 SFPQP23246 707 aaKnown RBP eCLIP12.47□□□□□ -0.41
TMEM116-218ENST00000552839 NAMPTP43490 491 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 CLCN4P51793 760 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 PEX3P56589 373 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 NCBP1Q09161 790 aaKnown RBP12.47□□□□□ -0.41
TMEM116-218ENST00000552839 STRN3Q13033 797 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 DRP2Q13474 957 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 CAMK4Q16566 473 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 NOMO2Q5JPE7 1267 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 L1TD1Q5T7N2 865 aaKnown RBP12.47□□□□□ -0.41
TMEM116-218ENST00000552839 PPFIBP1Q86W92 1011 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 KIAA2013Q8IYS2 634 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 ASAP3Q8TDY4 903 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 KLHL5Q96PQ7 755 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 TRAIPQ9BWF2 469 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 SEMA4AQ9H3S1 761 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 MRPL44Q9H9J2 332 aaKnown RBP12.47□□□□□ -0.41
TMEM116-218ENST00000552839 C17orf75Q9HAS0 396 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 CHST12Q9NRB3 414 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 IGSF9Q9P2J2 1179 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 R4GN57 208 aa12.47□□□□□ -0.41
TMEM116-218ENST00000552839 CARNS1A5YM72 827 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 SFI1A8K8P3 1242 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 STK25O00506 426 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 B4GALT3O60512 393 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 OFD1O75665 1012 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 CFHP08603 1231 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 CNPP09543 421 aaKnown RBP12.46□□□□□ -0.41
TMEM116-218ENST00000552839 KLRC2P26717 231 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 ABCD1P33897 745 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 SLC11A1P49279 550 aa12.46□□□□□ -0.41
TMEM116-218ENST00000552839 PNOCQ13519 176 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms