RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 LILRB3O75022 631 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 YEATS4O95619 227 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 EFEMP2O95967 443 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 URODP06132 367 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 MYBP10242 640 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 PDIA4P13667 645 aaKnown RBP18.3■□□□□ 0.52
BRF1-219ENST00000551787 KLRC2P26717 231 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 SMAD2Q15796 467 aaKnown RBP18.3■□□□□ 0.52
BRF1-219ENST00000551787 KIAA1841Q6NSI8 718 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 FUT10Q6P4F1 479 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 SHC4Q6S5L8 630 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 ZPBP2Q6X784 338 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 SFR1Q86XK3 245 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 GJD3Q8N144 294 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 KLHL5Q96PQ7 755 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 FIZ1Q96SL8 496 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 HERC2P3Q9BVR0 1158 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 GOLGA2P5Q9HBQ8 144 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 TBC1D7Q9P0N9 293 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 ADAM28Q9UKQ2 775 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 ZDHHC9Q9Y397 364 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 USP15Q9Y4E8 981 aaPredicted RBP18.3■□□□□ 0.52
BRF1-219ENST00000551787 ZMYM2Q9UBW7 1377 aa18.3■□□□□ 0.52
BRF1-219ENST00000551787 KIF4AO95239 1232 aa18.29■□□□□ 0.52
BRF1-219ENST00000551787 BRD1O95696 1058 aa18.29■□□□□ 0.52
BRF1-219ENST00000551787 SRGAP2BP0DMP2 458 aa18.29■□□□□ 0.52
BRF1-219ENST00000551787 ME1P48163 572 aa18.29■□□□□ 0.52
BRF1-219ENST00000551787 LIG4P49917 911 aa18.29■□□□□ 0.52
BRF1-219ENST00000551787 NOLC1Q14978 699 aaKnown RBP eCLIP18.29■□□□□ 0.52
BRF1-219ENST00000551787 AXDND1Q5T1B0 1012 aaPredicted RBP18.29■□□□□ 0.52
BRF1-219ENST00000551787 KIAA0319Q5VV43 1072 aa18.29■□□□□ 0.52
BRF1-219ENST00000551787 ALKAL1Q6UXT8 129 aa18.29■□□□□ 0.52
BRF1-219ENST00000551787 SLC22A17Q8WUG5 538 aa18.29■□□□□ 0.52
BRF1-219ENST00000551787 CASP10Q92851 521 aa18.29■□□□□ 0.52
BRF1-219ENST00000551787 KHSRPQ92945 711 aaKnown RBP eCLIP18.29■□□□□ 0.52
BRF1-219ENST00000551787 DNAJC19Q96DA6 116 aa18.29■□□□□ 0.52
BRF1-219ENST00000551787 ZMAT2Q96NC0 199 aaKnown RBP18.29■□□□□ 0.52
BRF1-219ENST00000551787 PPP1R10Q96QC0 940 aaKnown RBP18.29■□□□□ 0.52
BRF1-219ENST00000551787 EMILIN2Q9BXX0 1053 aa18.29■□□□□ 0.52
BRF1-219ENST00000551787 S1PR5Q9H228 398 aa18.29■□□□□ 0.52
BRF1-219ENST00000551787 FSD2A1L4K1 749 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 HNRNPDLO14979 420 aaKnown RBP18.28■□□□□ 0.52
BRF1-219ENST00000551787 CUTAO60888 179 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 WEE2P0C1S8 567 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 GLUD2P49448 558 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 CLCNKBP51801 687 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 GTF2BQ00403 316 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 ZP2Q05996 745 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 SPAG1Q07617 926 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 MCL1Q07820 350 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 SLC10A6Q3KNW5 377 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 RNF168Q8IYW5 571 aaPredicted RBP18.28■□□□□ 0.52
BRF1-219ENST00000551787 FEZF2Q8TBJ5 459 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 RIN2Q8WYP3 895 aaPredicted RBP18.28■□□□□ 0.52
BRF1-219ENST00000551787 C18orf25Q96B23 403 aaPredicted RBP18.28■□□□□ 0.52
BRF1-219ENST00000551787 IKZF4Q9H2S9 585 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 TOPORSQ9NS56 1045 aaPredicted RBP18.28■□□□□ 0.52
BRF1-219ENST00000551787 STK39Q9UEW8 545 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 PCDHA7Q9UN72 937 aa18.28■□□□□ 0.52
BRF1-219ENST00000551787 TDRD15B5MCY1 1934 aaKnown RBP18.27■□□□□ 0.52
BRF1-219ENST00000551787 TISP43B9A030 160 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 ANKRD63C9JTQ0 380 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 I3L4J1 428 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 TEX28O15482 410 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 SPATA31D3P0C874 917 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 IDEP14735 1019 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 RPL17P18621 184 aaKnown RBP18.27■□□□□ 0.52
BRF1-219ENST00000551787 DSG1Q02413 1049 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 SOX4Q06945 474 aaPredicted RBP18.27■□□□□ 0.52
BRF1-219ENST00000551787 USP41Q3LFD5 358 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 XKR4Q5GH76 650 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 ZBTB41Q5SVQ8 909 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 RARS2Q5T160 578 aaKnown RBP18.27■□□□□ 0.52
BRF1-219ENST00000551787 FAM171A1Q5VUB5 890 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 PRSS55Q6UWB4 352 aaPredicted RBP18.27■□□□□ 0.52
BRF1-219ENST00000551787 SPATA31D4Q6ZUB0 917 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 ZNF720Q7Z2F6 126 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 CEP57Q86XR8 500 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 GLYCTKQ8IVS8 523 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 ADHFE1Q8IWW8 467 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 TMEM130Q8N3G9 435 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 DHX58Q96C10 678 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 SNX27Q96L92 541 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 MRPL44Q9H9J2 332 aaKnown RBP18.27■□□□□ 0.52
BRF1-219ENST00000551787 CHST7Q9NS84 486 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 MYH11P35749 1972 aa18.27■□□□□ 0.52
BRF1-219ENST00000551787 B3GAT3O94766 335 aa18.26■□□□□ 0.51
BRF1-219ENST00000551787 CXCL8P10145 99 aa18.26■□□□□ 0.51
BRF1-219ENST00000551787 HOXB8P17481 243 aaPredicted RBP18.26■□□□□ 0.51
BRF1-219ENST00000551787 TNFSF9P41273 254 aa18.26■□□□□ 0.51
BRF1-219ENST00000551787 HERC4Q5GLZ8 1057 aaPredicted RBP18.26■□□□□ 0.51
BRF1-219ENST00000551787 RTP2Q5QGT7 225 aa18.26■□□□□ 0.51
BRF1-219ENST00000551787 SLC39A4Q6P5W5 647 aa18.26■□□□□ 0.51
BRF1-219ENST00000551787 DCLRE1AQ6PJP8 1040 aa18.26■□□□□ 0.51
BRF1-219ENST00000551787 PALB2Q86YC2 1186 aa18.26■□□□□ 0.51
BRF1-219ENST00000551787 KCNG4Q8TDN1 519 aa18.26■□□□□ 0.51
BRF1-219ENST00000551787 MSTO1Q9BUK6 570 aa18.26■□□□□ 0.51
BRF1-219ENST00000551787 EPHX3Q9H6B9 360 aa18.26■□□□□ 0.51
BRF1-219ENST00000551787 PRKAG3Q9UGI9 489 aa18.26■□□□□ 0.51
BRF1-219ENST00000551787 RCOR1Q9UKL0 485 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms