RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 XKR4Q5GH76 650 aa16.53■□□□□ 0.24
SMARCD1-211ENST00000551497 COLGALT2Q8IYK4 626 aa16.53■□□□□ 0.24
SMARCD1-211ENST00000551497 TMEM130Q8N3G9 435 aa16.53■□□□□ 0.24
SMARCD1-211ENST00000551497 MYLIPQ8WY64 445 aa16.53■□□□□ 0.24
SMARCD1-211ENST00000551497 ZNF558Q96NG5 402 aa16.53■□□□□ 0.24
SMARCD1-211ENST00000551497 AAASQ9NRG9 546 aa16.53■□□□□ 0.24
SMARCD1-211ENST00000551497 CPSF3Q9UKF6 684 aaKnown RBP16.53■□□□□ 0.24
SMARCD1-211ENST00000551497 MAN1B1Q9UKM7 699 aa16.53■□□□□ 0.24
SMARCD1-211ENST00000551497 PCDHB12Q9Y5F1 795 aa16.53■□□□□ 0.24
SMARCD1-211ENST00000551497 LACTBL1A8MY62 500 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 GOLGA6L22H0YM25 854 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 H3BNC9 293 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 BIN1O00499 593 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 ALDH2P05091 517 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 ITGB1P05556 798 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 THP07101 528 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 GARTP22102 1010 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 ALDH7A1P49419 539 aaKnown RBP16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 DSC1Q08554 894 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 NAB2Q15742 525 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 ARMCX5Q6P1M9 558 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 TMEM173Q86WV6 379 aaPredicted RBP16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 SPPL3Q8TCT6 385 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 NOC3LQ8WTT2 800 aaKnown RBP16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 RSPH1Q8WYR4 309 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 FAM212AQ96EL1 285 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 SNX27Q96L92 541 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 FAM213AQ9BRX8 229 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 PLVAPQ9BX97 442 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 KCTD10Q9H3F6 313 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 RPF1Q9H9Y2 349 aaKnown RBP16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 AGPAT3Q9NRZ7 376 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 TOPORSQ9NS56 1045 aaPredicted RBP16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 RWDD3Q9Y3V2 267 aa16.52■□□□□ 0.24
SMARCD1-211ENST00000551497 TDRD15B5MCY1 1934 aaKnown RBP16.52■□□□□ 0.23
SMARCD1-211ENST00000551497 UBE4BO95155 1302 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 TTC26A0AVF1 554 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 F8W810 466 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 TULP1O00294 542 aaPredicted RBP16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 NRP1O14786 923 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 FGF18O76093 207 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 KCNE1P15382 129 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 IGFBP6P24592 240 aaPredicted RBP16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 DNAJB1P25685 340 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 PRCPP42785 496 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 WNT7BP56706 349 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 GRIK3Q13003 919 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 KYAT1Q16773 422 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 ZNF658Q5TYW1 1059 aaPredicted RBP16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 SLC39A11Q8N1S5 342 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 BCL7CQ8WUZ0 217 aaPredicted RBP16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 C18orf25Q96B23 403 aaPredicted RBP16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 PPP1R10Q96QC0 940 aaKnown RBP16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 PAAF1Q9BRP4 392 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 CLSTN2Q9H4D0 955 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 RMND1Q9NWS8 449 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 SPG21Q9NZD8 308 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 FAN1Q9Y2M0 1017 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 CITO14578 2027 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 CHD7Q9P2D1 2997 aa16.51■□□□□ 0.23
SMARCD1-211ENST00000551497 CASTOR2A6NHX0 329 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 CSPG5O95196 566 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 ADRB2P07550 413 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 BMP6P22004 513 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 IGFBP4P22692 258 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 MCM4P33991 863 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 OR1G1P47890 313 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 CYP2J2P51589 502 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 SOX4Q06945 474 aaPredicted RBP16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 TUSC3Q13454 348 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 CAMK1Q14012 370 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 RDH13Q8NBN7 331 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 P2RX5Q93086 422 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 TMEM175Q9BSA9 504 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 C11orf84Q9BUA3 381 aaPredicted RBP16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 PLEKHA5Q9HAU0 1116 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 HSPBP1Q9NZL4 362 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 CNTN3Q9P232 1028 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 PRG3Q9Y2Y8 225 aaPredicted RBP16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 RALGAPA2Q2PPJ7 1873 aa16.5■□□□□ 0.23
SMARCD1-211ENST00000551497 MYO7AQ13402 2215 aa16.49■□□□□ 0.23
SMARCD1-211ENST00000551497 EXTL3O43909 919 aa16.49■□□□□ 0.23
SMARCD1-211ENST00000551497 ZBTB6Q15916 424 aa16.49■□□□□ 0.23
SMARCD1-211ENST00000551497 HS2ST1Q7LGA3 356 aa16.49■□□□□ 0.23
SMARCD1-211ENST00000551497 CBWD2Q8IUF1 395 aa16.49■□□□□ 0.23
SMARCD1-211ENST00000551497 GPD1LQ8N335 351 aa16.49■□□□□ 0.23
SMARCD1-211ENST00000551497 GUF1Q8N442 669 aaKnown RBP16.49■□□□□ 0.23
SMARCD1-211ENST00000551497 IGSF21Q96ID5 467 aa16.49■□□□□ 0.23
SMARCD1-211ENST00000551497 GOLGA2P5Q9HBQ8 144 aa16.49■□□□□ 0.23
SMARCD1-211ENST00000551497 KIAA1468Q9P260 1216 aa16.49■□□□□ 0.23
SMARCD1-211ENST00000551497 DLL1O00548 723 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 PDXKO00764 312 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 LDHAP00338 332 aaKnown RBP16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 CD44P16070 742 aaKnown RBP16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 GUCY2FP51841 1108 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 ERVFC1P60507 584 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 SNRPFP62306 86 aaKnown RBP16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 PLCB3Q01970 1234 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 PPP2R3AQ06190 1150 aa16.48■□□□□ 0.23
SMARCD1-211ENST00000551497 MORC3Q14149 939 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms