RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 SHDQ96IW2 340 aa25.42■■□□□ 1.66
SMARCD1-209ENST00000550477 CLSTN3Q9BQT9 956 aa25.42■■□□□ 1.66
SMARCD1-209ENST00000550477 PAAF1Q9BRP4 392 aa25.42■■□□□ 1.66
SMARCD1-209ENST00000550477 SEMA4AQ9H3S1 761 aa25.42■■□□□ 1.66
SMARCD1-209ENST00000550477 GDAQ9Y2T3 454 aa25.42■■□□□ 1.66
SMARCD1-209ENST00000550477 DOCK8Q8NF50 2099 aa25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 K7ERI5 159 aa25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 CCT6AP40227 531 aaKnown RBP25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 RBM25P49756 843 aaKnown RBP25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 FOXK2Q01167 660 aa25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 PHLDB3Q6NSJ2 640 aa25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 MTSS1LQ765P7 747 aa25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 RTL10Q7L3V2 364 aa25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 GRASPQ7Z6J2 395 aaPredicted RBP25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 FAM184AQ8NB25 1140 aa25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 UROC1Q96N76 676 aa25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 TBC1D17Q9HA65 648 aa25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 CDH7Q9ULB5 785 aa25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 POLIQ9UNA4 740 aa25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 RIF1Q5UIP0 2472 aaKnown RBP25.41■■□□□ 1.66
SMARCD1-209ENST00000550477 FAM186AA6NE01 2351 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 KRBA1A5PL33 1030 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 ANHXE9PGG2 379 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 PTGESO14684 152 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 C8AP07357 584 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 TRAPPC10P48553 1259 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 YARSP54577 528 aaKnown RBP25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 HMGN5P82970 282 aaKnown RBP25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 TTC38Q5R3I4 469 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 DCLRE1AQ6PJP8 1040 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 GPR152Q8TDT2 470 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 ARHGEF3Q9NR81 526 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 SLC2A4RGQ9NR83 387 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 CACNG4Q9UBN1 327 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 LRWD1Q9UFC0 647 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 SIT1Q9Y3P8 196 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 NUMBLQ9Y6R0 609 aa25.4■■□□□ 1.66
SMARCD1-209ENST00000550477 PHLPP2Q6ZVD8 1323 aa25.39■■□□□ 1.66
SMARCD1-209ENST00000550477 B3GAT3O94766 335 aa25.39■■□□□ 1.66
SMARCD1-209ENST00000550477 HTR4Q13639 388 aa25.39■■□□□ 1.66
SMARCD1-209ENST00000550477 ATF7IP2Q5U623 682 aa25.39■■□□□ 1.66
SMARCD1-209ENST00000550477 KCNG4Q8TDN1 519 aa25.39■■□□□ 1.66
SMARCD1-209ENST00000550477 BSNDQ8WZ55 320 aa25.39■■□□□ 1.66
SMARCD1-209ENST00000550477 CCDC113Q9H0I3 377 aa25.39■■□□□ 1.66
SMARCD1-209ENST00000550477 BHMT2Q9H2M3 363 aa25.39■■□□□ 1.66
SMARCD1-209ENST00000550477 TOPORSQ9NS56 1045 aaPredicted RBP25.39■■□□□ 1.66
SMARCD1-209ENST00000550477 TMEM189-UBE2V1I3L0A0 370 aa25.38■■□□□ 1.65
SMARCD1-209ENST00000550477 FXR2P51116 673 aaKnown RBP eCLIP25.38■■□□□ 1.65
SMARCD1-209ENST00000550477 RAB33AQ14088 237 aa25.38■■□□□ 1.65
SMARCD1-209ENST00000550477 PDIA5Q14554 519 aa25.38■■□□□ 1.65
SMARCD1-209ENST00000550477 CCDC83Q8IWF9 413 aa25.38■■□□□ 1.65
SMARCD1-209ENST00000550477 ADSSL1Q8N142 457 aa25.38■■□□□ 1.65
SMARCD1-209ENST00000550477 SNX27Q96L92 541 aa25.38■■□□□ 1.65
SMARCD1-209ENST00000550477 ZSCAN31Q96LW9 406 aaPredicted RBP25.38■■□□□ 1.65
SMARCD1-209ENST00000550477 TTLL13PA6NNM8 815 aa25.37■■□□□ 1.65
SMARCD1-209ENST00000550477 OR1D2P34982 312 aa25.37■■□□□ 1.65
SMARCD1-209ENST00000550477 AXDND1Q5T1B0 1012 aaPredicted RBP25.37■■□□□ 1.65
SMARCD1-209ENST00000550477 ERICH6BQ5W0A0 696 aa25.37■■□□□ 1.65
SMARCD1-209ENST00000550477 ZC3H14Q6PJT7 736 aaKnown RBP25.37■■□□□ 1.65
SMARCD1-209ENST00000550477 ANKS3Q6ZW76 656 aa25.37■■□□□ 1.65
SMARCD1-209ENST00000550477 FBXO18Q8NFZ0 1043 aa25.37■■□□□ 1.65
SMARCD1-209ENST00000550477 DDX27Q96GQ7 796 aaKnown RBP25.37■■□□□ 1.65
SMARCD1-209ENST00000550477 CCDC94Q9BW85 323 aaPredicted RBP25.37■■□□□ 1.65
SMARCD1-209ENST00000550477 SLC38A7Q9NVC3 462 aa25.37■■□□□ 1.65
SMARCD1-209ENST00000550477 KIAA1024Q9UPX6 916 aa25.37■■□□□ 1.65
SMARCD1-209ENST00000550477 CCDC169A6NNP5 214 aa25.36■■□□□ 1.65
SMARCD1-209ENST00000550477 CCL16O15467 120 aa25.36■■□□□ 1.65
SMARCD1-209ENST00000550477 POU2F2P09086 479 aa25.36■■□□□ 1.65
SMARCD1-209ENST00000550477 SLC7A14Q8TBB6 771 aa25.36■■□□□ 1.65
SMARCD1-209ENST00000550477 KCNG1Q9UIX4 513 aa25.36■■□□□ 1.65
SMARCD1-209ENST00000550477 DNM3Q9UQ16 869 aa25.36■■□□□ 1.65
SMARCD1-209ENST00000550477 TNFSF13BQ9Y275 285 aa25.36■■□□□ 1.65
SMARCD1-209ENST00000550477 USP34Q70CQ2 3546 aa25.36■■□□□ 1.65
SMARCD1-209ENST00000550477 FGFR3P22607 806 aa25.35■■□□□ 1.65
SMARCD1-209ENST00000550477 ELF1P32519 619 aa25.35■■□□□ 1.65
SMARCD1-209ENST00000550477 PFKPQ01813 784 aa25.35■■□□□ 1.65
SMARCD1-209ENST00000550477 NAB2Q15742 525 aa25.35■■□□□ 1.65
SMARCD1-209ENST00000550477 SPECC1Q5M775 1068 aa25.35■■□□□ 1.65
SMARCD1-209ENST00000550477 EEF1DP3Q658K8 133 aa25.35■■□□□ 1.65
SMARCD1-209ENST00000550477 MTRRQ9UBK8 725 aa25.35■■□□□ 1.65
SMARCD1-209ENST00000550477 KCNH3Q9ULD8 1083 aa25.35■■□□□ 1.65
SMARCD1-209ENST00000550477 BACE2Q9Y5Z0 518 aa25.35■■□□□ 1.65
SMARCD1-209ENST00000550477 LMNAP02545 664 aaKnown RBP25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 DMP1Q13316 513 aaPredicted RBP25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 PABPC1LQ4VXU2 614 aaKnown RBP25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 GLRA4Q5JXX5 417 aa25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 KRT79Q5XKE5 535 aa25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 SNX29Q8TEQ0 813 aa25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 FGF13Q92913 245 aa25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 PPP1R10Q96QC0 940 aaKnown RBP25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 KIFC3Q9BVG8 833 aa25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 TMEM134Q9H6X4 195 aa25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 SH2B1Q9NRF2 756 aaPredicted RBP25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 DDX19AQ9NUU7 478 aaKnown RBP25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 USP20Q9Y2K6 914 aa25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 RBM19Q9Y4C8 960 aaKnown RBP25.34■■□□□ 1.65
SMARCD1-209ENST00000550477 LAD1O00515 517 aa25.33■■□□□ 1.65
SMARCD1-209ENST00000550477 CLCNKBP51801 687 aa25.33■■□□□ 1.65
SMARCD1-209ENST00000550477 GPC5P78333 572 aa25.33■■□□□ 1.65
SMARCD1-209ENST00000550477 NT5DC1Q5TFE4 455 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms