RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 KINO60870 393 aaKnown RBP21.12■□□□□ 0.97
DDX54-207ENST00000550016 HOXD13P35453 343 aa21.12■□□□□ 0.97
DDX54-207ENST00000550016 SLC11A1P49279 550 aa21.12■□□□□ 0.97
DDX54-207ENST00000550016 KRT17Q04695 432 aa21.12■□□□□ 0.97
DDX54-207ENST00000550016 UBE3AQ05086 875 aa21.12■□□□□ 0.97
DDX54-207ENST00000550016 SNX27Q96L92 541 aa21.12■□□□□ 0.97
DDX54-207ENST00000550016 AGO2Q9UKV8 859 aaKnown RBP21.12■□□□□ 0.97
DDX54-207ENST00000550016 FAN1Q9Y2M0 1017 aa21.12■□□□□ 0.97
DDX54-207ENST00000550016 RHOBTB3O94955 611 aa21.11■□□□□ 0.97
DDX54-207ENST00000550016 GARTP22102 1010 aa21.11■□□□□ 0.97
DDX54-207ENST00000550016 ADSSP30520 456 aa21.11■□□□□ 0.97
DDX54-207ENST00000550016 STK4Q13043 487 aa21.11■□□□□ 0.97
DDX54-207ENST00000550016 PNOCQ13519 176 aa21.11■□□□□ 0.97
DDX54-207ENST00000550016 KCNB1Q14721 858 aa21.11■□□□□ 0.97
DDX54-207ENST00000550016 SLC10A6Q3KNW5 377 aa21.11■□□□□ 0.97
DDX54-207ENST00000550016 ELOA2Q8IYF1 753 aaPredicted RBP21.11■□□□□ 0.97
DDX54-207ENST00000550016 SCFD1Q8WVM8 642 aa21.11■□□□□ 0.97
DDX54-207ENST00000550016 POF1BQ8WVV4 589 aa21.11■□□□□ 0.97
DDX54-207ENST00000550016 PLEKHA5Q9HAU0 1116 aa21.11■□□□□ 0.97
DDX54-207ENST00000550016 PUF60Q9UHX1 559 aaKnown RBP21.11■□□□□ 0.97
DDX54-207ENST00000550016 LZTS1Q9Y250 596 aa21.11■□□□□ 0.97
DDX54-207ENST00000550016 SMIM28A0A1B0GU29 152 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 NRP1O14786 923 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 KCNE1P15382 129 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 DNAJB1P25685 340 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 TNFSF9P41273 254 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 OR1G1P47890 313 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 TUSC3Q13454 348 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 NAB2Q15742 525 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 BMT2Q1RMZ1 405 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 ZBTB41Q5SVQ8 909 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 TMEM169Q96HH4 297 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 IGSF21Q96ID5 467 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 GBP4Q96PP9 640 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 PPP1R10Q96QC0 940 aaKnown RBP21.1■□□□□ 0.97
DDX54-207ENST00000550016 RPF1Q9H9Y2 349 aaKnown RBP21.1■□□□□ 0.97
DDX54-207ENST00000550016 CNTN3Q9P232 1028 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 CPSF3Q9UKF6 684 aaKnown RBP21.1■□□□□ 0.97
DDX54-207ENST00000550016 CDH23Q9H251 3354 aa21.1■□□□□ 0.97
DDX54-207ENST00000550016 TTC26A0AVF1 554 aa21.09■□□□□ 0.97
DDX54-207ENST00000550016 MEFVO15553 781 aaPredicted RBP21.09■□□□□ 0.97
DDX54-207ENST00000550016 CXCL8P10145 99 aa21.09■□□□□ 0.97
DDX54-207ENST00000550016 ACOT2P49753 483 aa21.09■□□□□ 0.97
DDX54-207ENST00000550016 ENOX2Q16206 610 aaKnown RBP21.09■□□□□ 0.97
DDX54-207ENST00000550016 NELFCDQ8IXH7 590 aa21.09■□□□□ 0.97
DDX54-207ENST00000550016 KIAA0895Q8NCT3 520 aa21.09■□□□□ 0.97
DDX54-207ENST00000550016 COLEC11Q9BWP8 271 aa21.09■□□□□ 0.97
DDX54-207ENST00000550016 SMC2O95347 1197 aa21.08■□□□□ 0.97
DDX54-207ENST00000550016 LDHAP00338 332 aaKnown RBP21.08■□□□□ 0.97
DDX54-207ENST00000550016 ADRB2P07550 413 aa21.08■□□□□ 0.97
DDX54-207ENST00000550016 SNRPFP62306 86 aaKnown RBP21.08■□□□□ 0.97
DDX54-207ENST00000550016 POU5F1Q01860 360 aaKnown RBP21.08■□□□□ 0.97
DDX54-207ENST00000550016 CAMK1Q14012 370 aa21.08■□□□□ 0.97
DDX54-207ENST00000550016 KNOP1Q1ED39 458 aaKnown RBP21.08■□□□□ 0.97
DDX54-207ENST00000550016 GLRA4Q5JXX5 417 aa21.08■□□□□ 0.97
DDX54-207ENST00000550016 ARMCX5Q6P1M9 558 aa21.08■□□□□ 0.97
DDX54-207ENST00000550016 TMEM173Q86WV6 379 aaPredicted RBP21.08■□□□□ 0.97
DDX54-207ENST00000550016 MAFAQ8NHW3 353 aaPredicted RBP21.08■□□□□ 0.97
DDX54-207ENST00000550016 ZMAT2Q96NC0 199 aaKnown RBP21.08■□□□□ 0.97
DDX54-207ENST00000550016 GSDMAQ96QA5 445 aa21.08■□□□□ 0.97
DDX54-207ENST00000550016 SLC38A7Q9NVC3 462 aa21.08■□□□□ 0.97
DDX54-207ENST00000550016 LACTBL1A8MY62 500 aa21.07■□□□□ 0.96
DDX54-207ENST00000550016 KIAA0391O15091 583 aaKnown RBP21.07■□□□□ 0.96
DDX54-207ENST00000550016 TGFB1I1O43294 461 aa21.07■□□□□ 0.96
DDX54-207ENST00000550016 PPP2R3AQ06190 1150 aa21.07■□□□□ 0.96
DDX54-207ENST00000550016 PDE12Q6L8Q7 609 aaKnown RBP21.07■□□□□ 0.96
DDX54-207ENST00000550016 CRELD2Q6UXH1 353 aaPredicted RBP21.07■□□□□ 0.96
DDX54-207ENST00000550016 DDX53Q86TM3 631 aaKnown RBP21.07■□□□□ 0.96
DDX54-207ENST00000550016 CD302Q8IX05 232 aa21.07■□□□□ 0.96
DDX54-207ENST00000550016 MICALL1Q8N3F8 863 aa21.07■□□□□ 0.96
DDX54-207ENST00000550016 BCL7CQ8WUZ0 217 aaPredicted RBP21.07■□□□□ 0.96
DDX54-207ENST00000550016 TSPAN18Q96SJ8 248 aa21.07■□□□□ 0.96
DDX54-207ENST00000550016 CBWD1Q9BRT8 395 aa21.07■□□□□ 0.96
DDX54-207ENST00000550016 PCIF1Q9H4Z3 704 aa21.07■□□□□ 0.96
DDX54-207ENST00000550016 TLR9Q9NR96 1032 aa21.07■□□□□ 0.96
DDX54-207ENST00000550016 RMND1Q9NWS8 449 aa21.07■□□□□ 0.96
DDX54-207ENST00000550016 CGNQ9P2M7 1197 aaKnown RBP21.07■□□□□ 0.96
DDX54-207ENST00000550016 STK39Q9UEW8 545 aa21.07■□□□□ 0.96
DDX54-207ENST00000550016 PRG3Q9Y2Y8 225 aaPredicted RBP21.07■□□□□ 0.96
DDX54-207ENST00000550016 EXTL3O43909 919 aa21.06■□□□□ 0.96
DDX54-207ENST00000550016 ERVFC1P60507 584 aa21.06■□□□□ 0.96
DDX54-207ENST00000550016 CCDC85BQ15834 202 aaPredicted RBP21.06■□□□□ 0.96
DDX54-207ENST00000550016 TIGD5Q53EQ6 642 aa21.06■□□□□ 0.96
DDX54-207ENST00000550016 HS2ST1Q7LGA3 356 aa21.06■□□□□ 0.96
DDX54-207ENST00000550016 SPATA20Q8TB22 786 aa21.06■□□□□ 0.96
DDX54-207ENST00000550016 SMARCE1Q969G3 411 aa21.06■□□□□ 0.96
DDX54-207ENST00000550016 FAM212AQ96EL1 285 aa21.06■□□□□ 0.96
DDX54-207ENST00000550016 UROC1Q96N76 676 aa21.06■□□□□ 0.96
DDX54-207ENST00000550016 FAM213AQ9BRX8 229 aa21.06■□□□□ 0.96
DDX54-207ENST00000550016 AGPAT3Q9NRZ7 376 aa21.06■□□□□ 0.96
DDX54-207ENST00000550016 PCDHA5Q9Y5H7 936 aa21.06■□□□□ 0.96
DDX54-207ENST00000550016 CASTOR2A6NHX0 329 aa21.05■□□□□ 0.96
DDX54-207ENST00000550016 KIF20AO95235 890 aa21.05■□□□□ 0.96
DDX54-207ENST00000550016 HSP90AA2PQ14568 343 aaPredicted RBP21.05■□□□□ 0.96
DDX54-207ENST00000550016 GOLGA5Q8TBA6 731 aa21.05■□□□□ 0.96
DDX54-207ENST00000550016 MICAL1Q8TDZ2 1067 aa21.05■□□□□ 0.96
DDX54-207ENST00000550016 PPM1EQ8WY54 764 aa21.05■□□□□ 0.96
DDX54-207ENST00000550016 RABGGTAQ92696 567 aa21.05■□□□□ 0.96
DDX54-207ENST00000550016 SAAL1Q96ER3 474 aa21.05■□□□□ 0.96
DDX54-207ENST00000550016 PAAF1Q9BRP4 392 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms