RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 COLGALT2Q8IYK4 626 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 CEP120Q8N960 986 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 SPPL3Q8TCT6 385 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 MICAL1Q8TDZ2 1067 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 HCSTQ9UBK5 93 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 DNAJB4Q9UDY4 337 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 MTCH2Q9Y6C9 303 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 CHD9Q3L8U1 2897 aa16.3■□□□□ 0.2
GPN3-206ENST00000549963 SMIM28A0A1B0GU29 152 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 NT5C1B-RDH14C9J2C7 533 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 NRP1O14786 923 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 GRM6O15303 877 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 XPOTO43592 962 aaKnown RBP16.29■□□□□ 0.2
GPN3-206ENST00000549963 RHOBTB3O94955 611 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 PPP2R3AQ06190 1150 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 ADGRE1Q14246 886 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 KNOP1Q1ED39 458 aaKnown RBP16.29■□□□□ 0.2
GPN3-206ENST00000549963 SEZ6Q53EL9 994 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 SLC39A4Q6P5W5 647 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 ALKAL1Q6UXT8 129 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 SLC39A11Q8N1S5 342 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 MICALL1Q8N3F8 863 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 GSTCDQ8NEC7 633 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 GOLGA5Q8TBA6 731 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 POF1BQ8WVV4 589 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 SMARCE1Q969G3 411 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 FAM212AQ96EL1 285 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 UROC1Q96N76 676 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 GSDMAQ96QA5 445 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 KIAA1586Q9HCI6 787 aa16.29■□□□□ 0.2
GPN3-206ENST00000549963 PRR29P0C7W0 189 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 KCNE1P15382 129 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 PBX3P40426 434 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 SLC11A1P49279 550 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 DSC1Q08554 894 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 STK4Q13043 487 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 PNOCQ13519 176 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 SLC10A6Q3KNW5 377 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 TIGD5Q53EQ6 642 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 XKR4Q5GH76 650 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 DDX53Q86TM3 631 aaKnown RBP16.28■□□□□ 0.2
GPN3-206ENST00000549963 NELFCDQ8IXH7 590 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 NOC3LQ8WTT2 800 aaKnown RBP16.28■□□□□ 0.2
GPN3-206ENST00000549963 SCFD1Q8WVM8 642 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 DDX27Q96GQ7 796 aaKnown RBP16.28■□□□□ 0.2
GPN3-206ENST00000549963 IGSF21Q96ID5 467 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 SNX27Q96L92 541 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 FGFBP2Q9BYJ0 223 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 HAPLN2Q9GZV7 340 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 TLR9Q9NR96 1032 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 CNTN3Q9P232 1028 aa16.28■□□□□ 0.2
GPN3-206ENST00000549963 SZT2Q5T011 3432 aa16.27■□□□□ 0.2
GPN3-206ENST00000549963 TULP1O00294 542 aaPredicted RBP16.27■□□□□ 0.2
GPN3-206ENST00000549963 PTGESO14684 152 aa16.27■□□□□ 0.2
GPN3-206ENST00000549963 TADA2AO75478 443 aa16.27■□□□□ 0.2
GPN3-206ENST00000549963 CXCL8P10145 99 aa16.27■□□□□ 0.2
GPN3-206ENST00000549963 ACOT2P49753 483 aa16.27■□□□□ 0.2
GPN3-206ENST00000549963 BMT2Q1RMZ1 405 aa16.27■□□□□ 0.2
GPN3-206ENST00000549963 TMC7Q7Z402 723 aa16.27■□□□□ 0.2
GPN3-206ENST00000549963 GLIS3Q8NEA6 775 aa16.27■□□□□ 0.2
GPN3-206ENST00000549963 MAFAQ8NHW3 353 aaPredicted RBP16.27■□□□□ 0.2
GPN3-206ENST00000549963 PPP1R10Q96QC0 940 aaKnown RBP16.27■□□□□ 0.2
GPN3-206ENST00000549963 PCIF1Q9H4Z3 704 aa16.27■□□□□ 0.2
GPN3-206ENST00000549963 ASB7Q9H672 318 aa16.27■□□□□ 0.2
GPN3-206ENST00000549963 NGRNQ9NPE2 291 aaKnown RBP16.27■□□□□ 0.2
GPN3-206ENST00000549963 CPSF3Q9UKF6 684 aaKnown RBP16.27■□□□□ 0.2
GPN3-206ENST00000549963 PLXNA4Q9HCM2 1894 aa16.27■□□□□ 0.19
GPN3-206ENST00000549963 TTC26A0AVF1 554 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 LACTBL1A8MY62 500 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 TISP43B9A030 160 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 NCK2O43639 380 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 EXTL3O43909 919 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 IL18RAPO95256 599 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 ADSSP30520 456 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 RPL9P32969 192 aaKnown RBP16.26■□□□□ 0.19
GPN3-206ENST00000549963 TNFSF9P41273 254 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 CCDC85BQ15834 202 aaPredicted RBP16.26■□□□□ 0.19
GPN3-206ENST00000549963 ENOX2Q16206 610 aaKnown RBP16.26■□□□□ 0.19
GPN3-206ENST00000549963 GLRA4Q5JXX5 417 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 DCLRE1AQ6PJP8 1040 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 GPD1LQ8N335 351 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 PPM1EQ8WY54 764 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 KIF12Q96FN5 646 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 FAM213AQ9BRX8 229 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 NSUN3Q9H649 340 aaKnown RBP16.26■□□□□ 0.19
GPN3-206ENST00000549963 ENTPD7Q9NQZ7 604 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 SSX2IPQ9Y2D8 614 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 PRG3Q9Y2Y8 225 aaPredicted RBP16.26■□□□□ 0.19
GPN3-206ENST00000549963 DERAQ9Y315 318 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 PCDHA5Q9Y5H7 936 aa16.26■□□□□ 0.19
GPN3-206ENST00000549963 COL4A4P53420 1690 aaPredicted RBP16.26■□□□□ 0.19
GPN3-206ENST00000549963 CASTOR2A6NHX0 329 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 ZNF233A6NK53 670 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 PDXKO00764 312 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 TRAPPC3O43617 180 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 CALUO43852 315 aaPredicted RBP16.25■□□□□ 0.19
GPN3-206ENST00000549963 CA8P35219 290 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 ELAVL2Q12926 359 aaKnown RBP16.25■□□□□ 0.19
GPN3-206ENST00000549963 STIM1Q13586 685 aa16.25■□□□□ 0.19
GPN3-206ENST00000549963 SKIV2LQ15477 1246 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms