RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 ACO2Q99798 780 aaKnown RBP15.81■□□□□ 0.12
COL2A1-209ENST00000546974 TTPALQ9BTX7 342 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 RUSC1Q9BVN2 902 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 TIPINQ9BVW5 301 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 NT5C3AQ9H0P0 336 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 WDR6Q9NNW5 1121 aaKnown RBP15.81■□□□□ 0.12
COL2A1-209ENST00000546974 KMT5AQ9NQR1 393 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 ZDHHC7Q9NXF8 308 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 ARHGAP28Q9P2N2 729 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 KCNG1Q9UIX4 513 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 RBM19Q9Y4C8 960 aaKnown RBP15.81■□□□□ 0.12
COL2A1-209ENST00000546974 USP34Q70CQ2 3546 aa15.81■□□□□ 0.12
COL2A1-209ENST00000546974 DOCK6Q96HP0 2047 aa15.8■□□□□ 0.12
COL2A1-209ENST00000546974 RPL17P18621 184 aaKnown RBP15.8■□□□□ 0.12
COL2A1-209ENST00000546974 PTPN5P54829 565 aa15.8■□□□□ 0.12
COL2A1-209ENST00000546974 MAPK7Q13164 816 aa15.8■□□□□ 0.12
COL2A1-209ENST00000546974 FAM171A1Q5VUB5 890 aa15.8■□□□□ 0.12
COL2A1-209ENST00000546974 PDXDC1Q6P996 788 aa15.8■□□□□ 0.12
COL2A1-209ENST00000546974 PRSS55Q6UWB4 352 aaPredicted RBP15.8■□□□□ 0.12
COL2A1-209ENST00000546974 ALYREFQ86V81 257 aaKnown RBP15.8■□□□□ 0.12
COL2A1-209ENST00000546974 GLYCTKQ8IVS8 523 aa15.8■□□□□ 0.12
COL2A1-209ENST00000546974 LNX1Q8TBB1 728 aaPredicted RBP15.8■□□□□ 0.12
COL2A1-209ENST00000546974 PIK3R5Q8WYR1 880 aa15.8■□□□□ 0.12
COL2A1-209ENST00000546974 SMG7Q92540 1137 aaKnown RBP15.8■□□□□ 0.12
COL2A1-209ENST00000546974 ZNF707Q96C28 371 aaPredicted RBP15.8■□□□□ 0.12
COL2A1-209ENST00000546974 PPP1R10Q96QC0 940 aaKnown RBP15.8■□□□□ 0.12
COL2A1-209ENST00000546974 MRPL4Q9BYD3 311 aaKnown RBP15.8■□□□□ 0.12
COL2A1-209ENST00000546974 SMOC2Q9H3U7 446 aa15.8■□□□□ 0.12
COL2A1-209ENST00000546974 PTPRHQ9HD43 1115 aa15.8■□□□□ 0.12
COL2A1-209ENST00000546974 DMDP11532 3685 aa15.8■□□□□ 0.12
COL2A1-209ENST00000546974 CACNA1HO95180 2353 aa15.8■□□□□ 0.12
COL2A1-209ENST00000546974 CLUHO75153 1309 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 TMEM189-UBE2V1I3L0A0 370 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 PDGFBP01127 241 aaPredicted RBP15.79■□□□□ 0.12
COL2A1-209ENST00000546974 MYBP10242 640 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 GUCY2CP25092 1073 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 GRM5P41594 1212 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 NUBP1P53384 320 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 VCPP55072 806 aaKnown RBP15.79■□□□□ 0.12
COL2A1-209ENST00000546974 XKR4Q5GH76 650 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 ARL6IP4Q66PJ3 421 aaKnown RBP15.79■□□□□ 0.12
COL2A1-209ENST00000546974 DCLRE1AQ6PJP8 1040 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 TAS1R3Q7RTX0 852 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 CEP57Q86XR8 500 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 SYT2Q8N9I0 419 aaPredicted RBP15.79■□□□□ 0.12
COL2A1-209ENST00000546974 UROC1Q96N76 676 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 CLSTN3Q9BQT9 956 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 NTPCRQ9BSD7 190 aaKnown RBP15.79■□□□□ 0.12
COL2A1-209ENST00000546974 CCDC94Q9BW85 323 aaPredicted RBP15.79■□□□□ 0.12
COL2A1-209ENST00000546974 PRKD2Q9BZL6 878 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 CDT1Q9H211 546 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 KCNK12Q9HB15 430 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 IGSF9Q9P2J2 1179 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 SMC3Q9UQE7 1217 aa15.79■□□□□ 0.12
COL2A1-209ENST00000546974 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.79■□□□□ 0.12
COL2A1-209ENST00000546974 MYO15AQ9UKN7 3530 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 VWA3AA6NCI4 1184 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 N4BP1O75113 896 aaKnown RBP15.78■□□□□ 0.12
COL2A1-209ENST00000546974 ZMYND10O75800 440 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 PROZP22891 400 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 YARSP54577 528 aaKnown RBP15.78■□□□□ 0.12
COL2A1-209ENST00000546974 TDGQ13569 410 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 ZRSR1Q15695 479 aaKnown RBP15.78■□□□□ 0.12
COL2A1-209ENST00000546974 PSMD5Q16401 504 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 ZNF568Q3ZCX4 644 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 GLRA4Q5JXX5 417 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 ALKAL1Q6UXT8 129 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.78■□□□□ 0.12
COL2A1-209ENST00000546974 CEP120Q8N960 986 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 SPIRE2Q8WWL2 714 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 PNMA5Q96PV4 448 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 TARS2Q9BW92 718 aaKnown RBP15.78■□□□□ 0.12
COL2A1-209ENST00000546974 PIDD1Q9HB75 910 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 TOPORSQ9NS56 1045 aaPredicted RBP15.78■□□□□ 0.12
COL2A1-209ENST00000546974 KCND2Q9NZV8 630 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 EPS15L1Q9UBC2 864 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 FBXW11Q9UKB1 542 aa15.78■□□□□ 0.12
COL2A1-209ENST00000546974 SMIM28A0A1B0GU29 152 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 SFI1A8K8P3 1242 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 SLC16A4O15374 487 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 SLC26A4O43511 780 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 B3GAT3O94766 335 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 MCF2P10911 925 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 GBP2P32456 591 aaPredicted RBP15.77■□□□□ 0.12
COL2A1-209ENST00000546974 MRE11P49959 708 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 CLCNKBP51801 687 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 SMTNP53814 917 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 SLC12A3P55017 1021 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 TCF15Q12870 199 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 UPP1Q16831 310 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 NXPE3Q969Y0 559 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 CDK5RAP3Q96JB5 506 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 AK8Q96MA6 479 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 TBC1D32Q96NH3 1257 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 IRF2BPLQ9H1B7 796 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 DUSP12Q9UNI6 340 aa15.77■□□□□ 0.12
COL2A1-209ENST00000546974 ABLIM1O14639 778 aa15.76■□□□□ 0.11
COL2A1-209ENST00000546974 TRAPPC3O43617 180 aa15.76■□□□□ 0.11
COL2A1-209ENST00000546974 PLA2G4BP0C869 781 aa15.76■□□□□ 0.11
COL2A1-209ENST00000546974 PLS3P13797 630 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 196.3 ms