RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 HIBCHQ6NVY1 386 aaPredicted RBP11.04□□□□□ -0.64
SSH1-203ENST00000546433 RWDD4Q6NW29 188 aaKnown RBP11.04□□□□□ -0.64
SSH1-203ENST00000546433 POLR3FQ9H1D9 316 aaPredicted RBP11.04□□□□□ -0.64
SSH1-203ENST00000546433 PDS5AQ29RF7 1337 aaKnown RBP11.03□□□□□ -0.64
SSH1-203ENST00000546433 TRAPPC3O43617 180 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 IL1RL1Q01638 556 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 PPP6R3Q5H9R7 873 aaPredicted RBP11.03□□□□□ -0.64
SSH1-203ENST00000546433 C12orf60Q5U649 245 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 ACAP3Q96P50 834 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 YME1L1Q96TA2 773 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 XPNPEP3Q9NQH7 507 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 KCND2Q9NZV8 630 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 NMT2O60551 498 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 IGFBP4P22692 258 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 PPP2R2AP63151 447 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 KIAA1755Q5JYT7 1200 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 CHMP6Q96FZ7 201 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 MRIQ9BWK5 157 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 FBXO2Q9UK22 296 aaPredicted RBP11.03□□□□□ -0.64
SSH1-203ENST00000546433 TTC26A0AVF1 554 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 POTEFA5A3E0 1075 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 TBX3O15119 743 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 SPAG7O75391 227 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 KCNA4P22459 653 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 ARID5BQ14865 1188 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 VEPH1Q14D04 833 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 DACT2Q5SW24 774 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 POTEGQ6S5H5 508 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 POTEEQ6S8J3 1075 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 KSR1Q8IVT5 923 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.03□□□□□ -0.64
SSH1-203ENST00000546433 PARD3BQ8TEW8 1205 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 FGD4Q96M96 766 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 C11orf70Q9BRQ4 267 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 EHD4Q9H223 541 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 NOP53Q9NZM5 478 aaKnown RBP11.03□□□□□ -0.64
SSH1-203ENST00000546433 GABBR1Q9UBS5 961 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 MRFAP1Q9Y605 127 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 WDR91A4D1P6 747 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 EFCAB14O75071 495 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 OCRLQ01968 901 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 YWHAHQ04917 246 aaPredicted RBP11.03□□□□□ -0.64
SSH1-203ENST00000546433 ELAC2Q9BQ52 826 aaKnown RBP11.03□□□□□ -0.64
SSH1-203ENST00000546433 FSD1LQ9BXM9 530 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 PARVAQ9NVD7 372 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.03□□□□□ -0.64
SSH1-203ENST00000546433 SALL1Q9NSC2 1324 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 COPS2P61201 443 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 LLGL1Q15334 1064 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 GRAMD1AQ96CP6 724 aa11.03□□□□□ -0.64
SSH1-203ENST00000546433 TPX2Q9ULW0 747 aaKnown RBP11.03□□□□□ -0.64
SSH1-203ENST00000546433 M0QYV0 167 aa11.02□□□□□ -0.64
SSH1-203ENST00000546433 SLC4A1P02730 911 aa11.02□□□□□ -0.64
SSH1-203ENST00000546433 FTLP02792 175 aaPredicted RBP11.02□□□□□ -0.64
SSH1-203ENST00000546433 DRP2Q13474 957 aa11.02□□□□□ -0.64
SSH1-203ENST00000546433 E2F5Q15329 346 aa11.02□□□□□ -0.64
SSH1-203ENST00000546433 ATP11CQ8NB49 1132 aa11.02□□□□□ -0.64
SSH1-203ENST00000546433 TTC17Q96AE7 1141 aa11.02□□□□□ -0.64
SSH1-203ENST00000546433 ZNF560Q96MR9 790 aa11.02□□□□□ -0.64
SSH1-203ENST00000546433 FIS1Q9Y3D6 152 aa11.02□□□□□ -0.64
SSH1-203ENST00000546433 STXBP3O00186 592 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 MAGEB2O15479 319 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 HERVK_113P62684 666 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 ROR1Q01973 937 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 C15orf52Q6ZUT6 534 aaKnown RBP11.02□□□□□ -0.65
SSH1-203ENST00000546433 ATG9AQ7Z3C6 839 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 HAUS6Q7Z4H7 955 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 ST13P4Q8IZP2 240 aaPredicted RBP11.02□□□□□ -0.65
SSH1-203ENST00000546433 KIFC3Q9BVG8 833 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 PHF20Q9BVI0 1012 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 EIF2AQ9BY44 585 aaKnown RBP11.02□□□□□ -0.65
SSH1-203ENST00000546433 TRPV6Q9H1D0 765 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 SUDS3Q9H7L9 328 aaPredicted RBP11.02□□□□□ -0.65
SSH1-203ENST00000546433 LMCD1Q9NZU5 365 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 HPCAL4Q9UM19 191 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 PSMC1P62191 440 aaKnown RBP11.02□□□□□ -0.65
SSH1-203ENST00000546433 VGLL4Q14135 290 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 TERF2Q15554 542 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 SLC44A5Q8NCS7 719 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 TRPM4Q8TD43 1214 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 PPP1R16BQ96T49 567 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 NDE1Q9NXR1 346 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 INPP5FQ9Y2H2 1132 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 PCDHB12Q9Y5F1 795 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 PCDHA10Q9Y5I2 948 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 SRGAP2O75044 1071 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 APOEP02649 317 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 CASP1P29466 404 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 GGCXP38435 758 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 SLC12A1Q13621 1099 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 EFHC2Q5JST6 749 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 HEATR6Q6AI08 1181 aaKnown RBP11.02□□□□□ -0.65
SSH1-203ENST00000546433 SWSAP1Q6NVH7 229 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 SPDYE1Q8NFV5 336 aaPredicted RBP11.02□□□□□ -0.65
SSH1-203ENST00000546433 TTC8Q8TAM2 541 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 IFT43Q96FT9 208 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 C7orf25Q9BPX7 421 aa11.02□□□□□ -0.65
SSH1-203ENST00000546433 SENP6Q9GZR1 1112 aaPredicted RBP11.02□□□□□ -0.65
SSH1-203ENST00000546433 SPATS2LQ9NUQ6 558 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms