RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 EPC2Q52LR7 807 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 SPOUT1Q5T280 376 aaKnown RBP22.63■■□□□ 1.21
SCARB1-211ENST00000546215 ZNF697Q5TEC3 545 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 TRIML1Q8N9V2 468 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 TMEM174Q8WUU8 243 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 ZMAT2Q96NC0 199 aaKnown RBP22.63■■□□□ 1.21
SCARB1-211ENST00000546215 SAMD11Q96NU1 681 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 FAM213AQ9BRX8 229 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 RPF1Q9H9Y2 349 aaKnown RBP22.63■■□□□ 1.21
SCARB1-211ENST00000546215 PLEKHA5Q9HAU0 1116 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 MTUS1Q9ULD2 1270 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 RWDD3Q9Y3V2 267 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 RALGAPA2Q2PPJ7 1873 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 SMIM28A0A1B0GU29 152 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 EXTL3O43909 919 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 THP07101 528 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 KCNE1P15382 129 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 DSC1Q08554 894 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 NAB2Q15742 525 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 GLRA4Q5JXX5 417 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 ADSSL1Q8N142 457 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 GPD1LQ8N335 351 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 PPP1R10Q96QC0 940 aaKnown RBP22.63■■□□□ 1.21
SCARB1-211ENST00000546215 DNAJB4Q9UDY4 337 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 TRAF3IP3Q9Y228 551 aa22.63■■□□□ 1.21
SCARB1-211ENST00000546215 GOLGA8IPA6NC78 632 aa22.62■■□□□ 1.21
SCARB1-211ENST00000546215 GOLGA8JA6NMD2 632 aa22.62■■□□□ 1.21
SCARB1-211ENST00000546215 LACTBL1A8MY62 500 aa22.62■■□□□ 1.21
SCARB1-211ENST00000546215 C5orf67F2Z3F1 127 aa22.62■■□□□ 1.21
SCARB1-211ENST00000546215 ZC3H11AO75152 810 aaKnown RBP eCLIP22.62■■□□□ 1.21
SCARB1-211ENST00000546215 LAG3P18627 525 aa22.62■■□□□ 1.21
SCARB1-211ENST00000546215 COLGALT2Q8IYK4 626 aa22.62■■□□□ 1.21
SCARB1-211ENST00000546215 COLGALT1Q8NBJ5 622 aa22.62■■□□□ 1.21
SCARB1-211ENST00000546215 ARNTL2Q8WYA1 636 aa22.62■■□□□ 1.21
SCARB1-211ENST00000546215 FBXL18Q96ME1 805 aa22.62■■□□□ 1.21
SCARB1-211ENST00000546215 DMAC2Q9NW81 257 aa22.62■■□□□ 1.21
SCARB1-211ENST00000546215 EPOPA6NHQ4 379 aa22.61■■□□□ 1.21
SCARB1-211ENST00000546215 CD44P16070 742 aaKnown RBP22.61■■□□□ 1.21
SCARB1-211ENST00000546215 CTNNB1P35222 781 aa22.61■■□□□ 1.21
SCARB1-211ENST00000546215 PBX3P40426 434 aa22.61■■□□□ 1.21
SCARB1-211ENST00000546215 BCAR1P56945 870 aa22.61■■□□□ 1.21
SCARB1-211ENST00000546215 ZCWPW2Q504Y3 356 aa22.61■■□□□ 1.21
SCARB1-211ENST00000546215 KCNT2Q6UVM3 1135 aa22.61■■□□□ 1.21
SCARB1-211ENST00000546215 RBM43Q6ZSC3 357 aaKnown RBP22.61■■□□□ 1.21
SCARB1-211ENST00000546215 SLC9A9Q8IVB4 645 aa22.61■■□□□ 1.21
SCARB1-211ENST00000546215 FAM193BQ96PV7 902 aaPredicted RBP22.61■■□□□ 1.21
SCARB1-211ENST00000546215 PLVAPQ9BX97 442 aa22.61■■□□□ 1.21
SCARB1-211ENST00000546215 AAASQ9NRG9 546 aa22.61■■□□□ 1.21
SCARB1-211ENST00000546215 PPP1R3GB7ZBB8 358 aa22.6■■□□□ 1.21
SCARB1-211ENST00000546215 CALUO43852 315 aaPredicted RBP22.6■■□□□ 1.21
SCARB1-211ENST00000546215 RB1P06400 928 aa22.6■■□□□ 1.21
SCARB1-211ENST00000546215 GALTP07902 379 aa22.6■■□□□ 1.21
SCARB1-211ENST00000546215 CYP2J2P51589 502 aa22.6■■□□□ 1.21
SCARB1-211ENST00000546215 PPP2R3AQ06190 1150 aa22.6■■□□□ 1.21
SCARB1-211ENST00000546215 GRIN2CQ14957 1233 aa22.6■■□□□ 1.21
SCARB1-211ENST00000546215 CENPPQ6IPU0 288 aa22.6■■□□□ 1.21
SCARB1-211ENST00000546215 Q7L0L9 218 aa22.6■■□□□ 1.21
SCARB1-211ENST00000546215 XXYLT1Q8NBI6 393 aa22.6■■□□□ 1.21
SCARB1-211ENST00000546215 KIAA1586Q9HCI6 787 aa22.6■■□□□ 1.21
SCARB1-211ENST00000546215 PCDHB12Q9Y5F1 795 aa22.6■■□□□ 1.21
SCARB1-211ENST00000546215 ANK1P16157 1881 aa22.6■■□□□ 1.21
SCARB1-211ENST00000546215 NR3C1P04150 777 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 SLC11A1P49279 550 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 ALDH7A1P49419 539 aaKnown RBP22.59■■□□□ 1.21
SCARB1-211ENST00000546215 NFIL3Q16649 462 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 CBWD2Q8IUF1 395 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 BRSK2Q8IWQ3 736 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 CD302Q8IX05 232 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 FBXO22Q8NEZ5 403 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 P2RX5Q93086 422 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 FAM161BQ96MY7 647 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 ZNF558Q96NG5 402 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 TMEM175Q9BSA9 504 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 ASB7Q9H672 318 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 PDCD11Q14690 1871 aaKnown RBP22.59■■□□□ 1.21
SCARB1-211ENST00000546215 ALDH2P05091 517 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 PTMSP20962 102 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 PPP1R2P41236 205 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 WNT7BP56706 349 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 SPAG1Q07617 926 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 TUSC3Q13454 348 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 STIM1Q13586 685 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 MYBPC2Q14324 1141 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 ZBTB6Q15916 424 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 CCDC183Q5T5S1 534 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 KLHL23Q8NBE8 558 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 NOC3LQ8WTT2 800 aaKnown RBP22.59■■□□□ 1.21
SCARB1-211ENST00000546215 FAM212AQ96EL1 285 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 DHTKD1Q96HY7 919 aaPredicted RBP22.59■■□□□ 1.21
SCARB1-211ENST00000546215 RBAKQ9NYW8 714 aaPredicted RBP22.59■■□□□ 1.21
SCARB1-211ENST00000546215 TMEM63CQ9P1W3 806 aa22.59■■□□□ 1.21
SCARB1-211ENST00000546215 ZNF233A6NK53 670 aa22.58■■□□□ 1.2
SCARB1-211ENST00000546215 NT5C1B-RDH14C9J2C7 533 aa22.58■■□□□ 1.2
SCARB1-211ENST00000546215 NRP1O14786 923 aa22.58■■□□□ 1.2
SCARB1-211ENST00000546215 PMS1P54277 932 aaKnown RBP22.58■■□□□ 1.2
SCARB1-211ENST00000546215 SOX4Q06945 474 aaPredicted RBP22.58■■□□□ 1.2
SCARB1-211ENST00000546215 SNRNP35Q16560 246 aaKnown RBP22.58■■□□□ 1.2
SCARB1-211ENST00000546215 EDRF1Q3B7T1 1238 aa22.58■■□□□ 1.2
SCARB1-211ENST00000546215 SLC39A11Q8N1S5 342 aa22.58■■□□□ 1.2
SCARB1-211ENST00000546215 DEFB123Q8N688 67 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms