RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 GRIN2CQ14957 1233 aa22.31■■□□□ 1.16
HMGA2-211ENST00000545998 ENOX2Q16206 610 aaKnown RBP22.31■■□□□ 1.16
HMGA2-211ENST00000545998 SAAL1Q96ER3 474 aa22.31■■□□□ 1.16
HMGA2-211ENST00000545998 FAM161BQ96MY7 647 aa22.31■■□□□ 1.16
HMGA2-211ENST00000545998 PLVAPQ9BX97 442 aa22.31■■□□□ 1.16
HMGA2-211ENST00000545998 NUP62CLQ9H1M0 184 aa22.31■■□□□ 1.16
HMGA2-211ENST00000545998 AAASQ9NRG9 546 aa22.31■■□□□ 1.16
HMGA2-211ENST00000545998 DNAJB4Q9UDY4 337 aa22.31■■□□□ 1.16
HMGA2-211ENST00000545998 COL4A4P53420 1690 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-211ENST00000545998 TTC26A0AVF1 554 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 CLIC2O15247 247 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 ZC3H11AO75152 810 aaKnown RBP eCLIP22.3■■□□□ 1.16
HMGA2-211ENST00000545998 MBD3O95983 291 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 THP07101 528 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 ADRB2P07550 413 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 BMP6P22004 513 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 POU5F1Q01860 360 aaKnown RBP22.3■■□□□ 1.16
HMGA2-211ENST00000545998 MORC3Q14149 939 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 NAB2Q15742 525 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 ISM2Q6H9L7 571 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 C12orf56Q8IXR9 622 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 COLGALT2Q8IYK4 626 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 DEFB123Q8N688 67 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 FBXO22Q8NEZ5 403 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 GOLGA5Q8TBA6 731 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 PPP1R10Q96QC0 940 aaKnown RBP22.3■■□□□ 1.16
HMGA2-211ENST00000545998 RPF1Q9H9Y2 349 aaKnown RBP22.3■■□□□ 1.16
HMGA2-211ENST00000545998 PLEKHA5Q9HAU0 1116 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 HSPBP1Q9NZL4 362 aa22.3■■□□□ 1.16
HMGA2-211ENST00000545998 SMIM28A0A1B0GU29 152 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 PDXKO00764 312 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 KIAA0391O15091 583 aaKnown RBP22.29■■□□□ 1.16
HMGA2-211ENST00000545998 LDHAP00338 332 aaKnown RBP22.29■■□□□ 1.16
HMGA2-211ENST00000545998 RB1P06400 928 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 KCNE1P15382 129 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 PBX3P40426 434 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 PRCPP42785 496 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 BCAR1P56945 870 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 GLRA4Q5JXX5 417 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 KCNT2Q6UVM3 1135 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 ZMAT2Q96NC0 199 aaKnown RBP22.29■■□□□ 1.16
HMGA2-211ENST00000545998 ZNF558Q96NG5 402 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 FAM193BQ96PV7 902 aaPredicted RBP22.29■■□□□ 1.16
HMGA2-211ENST00000545998 FAM213AQ9BRX8 229 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 PLXNA4Q9HCM2 1894 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 PCDHB12Q9Y5F1 795 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 EXTL3O43909 919 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 GPD1LQ8N335 351 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 TMEM174Q8WUU8 243 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 P2RX5Q93086 422 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 TMEM175Q9BSA9 504 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 PRDM12Q9H4Q4 367 aa22.29■■□□□ 1.16
HMGA2-211ENST00000545998 GOLGA8IPA6NC78 632 aa22.28■■□□□ 1.16
HMGA2-211ENST00000545998 GOLGA8JA6NMD2 632 aa22.28■■□□□ 1.16
HMGA2-211ENST00000545998 LACTBL1A8MY62 500 aa22.28■■□□□ 1.16
HMGA2-211ENST00000545998 BIN1O00499 593 aa22.28■■□□□ 1.16
HMGA2-211ENST00000545998 GALTP07902 379 aa22.28■■□□□ 1.16
HMGA2-211ENST00000545998 SLC11A1P49279 550 aa22.28■■□□□ 1.16
HMGA2-211ENST00000545998 ALDH7A1P49419 539 aaKnown RBP22.28■■□□□ 1.16
HMGA2-211ENST00000545998 PPP2R3AQ06190 1150 aa22.28■■□□□ 1.16
HMGA2-211ENST00000545998 ADSSL1Q8N142 457 aa22.28■■□□□ 1.16
HMGA2-211ENST00000545998 KLHL23Q8NBE8 558 aa22.28■■□□□ 1.16
HMGA2-211ENST00000545998 FBXL18Q96ME1 805 aa22.28■■□□□ 1.16
HMGA2-211ENST00000545998 C11orf84Q9BUA3 381 aaPredicted RBP22.28■■□□□ 1.16
HMGA2-211ENST00000545998 TRAF3IP3Q9Y228 551 aa22.28■■□□□ 1.16
HMGA2-211ENST00000545998 H3BNC9 293 aa22.27■■□□□ 1.16
HMGA2-211ENST00000545998 RFXAPO00287 272 aa22.27■■□□□ 1.16
HMGA2-211ENST00000545998 TUSC3Q13454 348 aa22.27■■□□□ 1.16
HMGA2-211ENST00000545998 SLC9A9Q8IVB4 645 aa22.27■■□□□ 1.16
HMGA2-211ENST00000545998 CD302Q8IX05 232 aa22.27■■□□□ 1.16
HMGA2-211ENST00000545998 SLC39A11Q8N1S5 342 aa22.27■■□□□ 1.16
HMGA2-211ENST00000545998 TRIML1Q8N9V2 468 aa22.27■■□□□ 1.16
HMGA2-211ENST00000545998 GDPD5Q8WTR4 605 aa22.27■■□□□ 1.16
HMGA2-211ENST00000545998 DMAC2Q9NW81 257 aa22.27■■□□□ 1.16
HMGA2-211ENST00000545998 CARNS1A5YM72 827 aa22.26■■□□□ 1.15
HMGA2-211ENST00000545998 NT5C1B-RDH14C9J2C7 533 aa22.26■■□□□ 1.15
HMGA2-211ENST00000545998 CALUO43852 315 aaPredicted RBP22.26■■□□□ 1.15
HMGA2-211ENST00000545998 CYP2J2P51589 502 aa22.26■■□□□ 1.15
HMGA2-211ENST00000545998 ZCWPW2Q504Y3 356 aa22.26■■□□□ 1.15
HMGA2-211ENST00000545998 BRSK2Q8IWQ3 736 aa22.26■■□□□ 1.15
HMGA2-211ENST00000545998 XXYLT1Q8NBI6 393 aa22.26■■□□□ 1.15
HMGA2-211ENST00000545998 GUCD1Q96NT3 240 aa22.26■■□□□ 1.15
HMGA2-211ENST00000545998 KIAA1586Q9HCI6 787 aa22.26■■□□□ 1.15
HMGA2-211ENST00000545998 MTMR10Q9NXD2 777 aa22.26■■□□□ 1.15
HMGA2-211ENST00000545998 SPG21Q9NZD8 308 aa22.26■■□□□ 1.15
HMGA2-211ENST00000545998 COL6A3P12111 3177 aa22.26■■□□□ 1.15
HMGA2-211ENST00000545998 SPTBN5Q9NRC6 3674 aaKnown RBP22.26■■□□□ 1.15
HMGA2-211ENST00000545998 MYO7AQ13402 2215 aa22.26■■□□□ 1.15
HMGA2-211ENST00000545998 NRP1O14786 923 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 LPXNO60711 386 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 FGF18O76093 207 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 ALDH2P05091 517 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 ITGB1P05556 798 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 CD44P16070 742 aaKnown RBP22.25■■□□□ 1.15
HMGA2-211ENST00000545998 PPM1AP35813 382 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 GPM6BQ13491 265 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 NFIL3Q16649 462 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 TMEM173Q86WV6 379 aaPredicted RBP22.25■■□□□ 1.15
HMGA2-211ENST00000545998 CBWD2Q8IUF1 395 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 NOC3LQ8WTT2 800 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms