RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ANO10Q9NW15 660 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 RBAKQ9NYW8 714 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 FRMD4BQ9Y2L6 1034 aa15.75■□□□□ 0.11
TNFRSF1A-216ENST00000543995 LCHNA4D1U4 455 aa15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ZNF233A6NK53 670 aa15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CA3P07451 260 aa15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SMAD3P84022 425 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ADAM9Q13443 819 aa15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 MYBPC2Q14324 1141 aa15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ENOX2Q16206 610 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SNRNP35Q16560 246 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CBWD2Q8IUF1 395 aa15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SLC9A9Q8IVB4 645 aa15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 FIBCD1Q8N539 461 aa15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PLEKHA5Q9HAU0 1116 aa15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 TBC1D13Q9NVG8 400 aa15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 MIOSQ9NXC5 875 aa15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ANK1P16157 1881 aa15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 COL4A6Q14031 1691 aa15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PDCD11Q14690 1871 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1A-216ENST00000543995 LACTBL1A8MY62 500 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 THP07101 528 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 FKBP3Q00688 224 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 TYRO3Q06418 890 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SPAG1Q07617 926 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 GRIK3Q13003 919 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 NFIL3Q16649 462 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ALKAL1Q6UXT8 129 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 BRSK2Q8IWQ3 736 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SP7Q8TDD2 431 aaPredicted RBP15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 EEF2KMTQ96G04 330 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 FBXL18Q96ME1 805 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CXCL16Q9H2A7 254 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 NKX2-4Q9H2Z4 354 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 DMAC2Q9NW81 257 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CNTN3Q9P232 1028 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 RWDD2AQ9UIY3 292 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 YBX2Q9Y2T7 364 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SMIM28A0A1B0GU29 152 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 TTC26A0AVF1 554 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PTGESO14684 152 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CETN3O15182 167 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 INPPL1O15357 1258 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 IL18RAPO95256 599 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CCDC192P0DO97 292 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 DNAJB2P25686 324 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CASP4P49662 377 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 POU5F1Q01860 360 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ZSCAN23Q3MJ62 389 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PPP2R2DQ66LE6 453 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 TTI2Q6NXR4 508 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 LRRC55Q6ZSA7 311 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CD302Q8IX05 232 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 GSTCDQ8NEC7 633 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 TMEM174Q8WUU8 243 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 KIF12Q96FN5 646 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ASB7Q9H672 318 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 HCSTQ9UBK5 93 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PLAGL2Q9UPG8 496 aa15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 MRPL42Q9Y6G3 142 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-216ENST00000543995 KIAA1671Q9BY89 1806 aa15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 NLRC5Q86WI3 1866 aa15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 LINC01553A4QN01 128 aa15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 MEFVO15553 781 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ZC3H11AO75152 810 aaKnown RBP eCLIP15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ADRB2P07550 413 aa15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 KCNE1P15382 129 aa15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ERCC5P28715 1186 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PSMC2P35998 433 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 TPD52L1Q16890 204 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 XKR4Q5GH76 650 aa15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 JADE1Q6IE81 842 aa15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ZNF280BQ86YH2 543 aa15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CSGALNACT2Q8N6G5 542 aa15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 TIFAQ96CG3 184 aa15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 ZMAT2Q96NC0 199 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SLC28A3Q9HAS3 691 aa15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PDE11AQ9HCR9 933 aa15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SLC38A7Q9NVC3 462 aa15.72■□□□□ 0.11
TNFRSF1A-216ENST00000543995 DDHD2O94830 711 aa15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 EPB41P11171 864 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CYP24A1Q07973 514 aa15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 TMEM132DQ14C87 1099 aa15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 SURF1Q15526 300 aa15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CT47A1Q5JQC4 288 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 FOXR2Q6PJQ5 311 aa15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 FAM186BQ8IYM0 893 aa15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CCDC127Q96BQ5 260 aa15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 PPP1R10Q96QC0 940 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 FNBP1Q96RU3 617 aa15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 DUSP9Q99956 384 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 GZF1Q9H116 711 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 DNAJC25Q9H1X3 360 aa15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CWH43Q9H720 699 aa15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 NRDE2Q9H7Z3 1164 aa15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 AAASQ9NRG9 546 aa15.71■□□□□ 0.11
TNFRSF1A-216ENST00000543995 CASTOR2A6NHX0 329 aa15.7■□□□□ 0.1
TNFRSF1A-216ENST00000543995 XPOTO43592 962 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1A-216ENST00000543995 AKAP3O75969 853 aa15.7■□□□□ 0.1
TNFRSF1A-216ENST00000543995 FGFR1OPO95684 399 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms