RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 DACT2Q5SW24 774 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 SHC4Q6S5L8 630 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 MYRIPQ8NFW9 859 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 RAB3IPQ96QF0 476 aaPredicted RBP7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 AK9Q5TCS8 1911 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 ZC3H4Q9UPT8 1303 aaKnown RBP7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 NPHP3-ACAD11A0A0J9YXS1 232 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 KPNA6O60684 536 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 INHBEP58166 350 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 NCOA4Q13772 614 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 SNRNP35Q16560 246 aaKnown RBP7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 SGSM1Q2NKQ1 1148 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 PGBD3Q8N328 593 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 STKLD1Q8NE28 680 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 SOCS4Q8WXH5 440 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 SEPT8Q92599 483 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 PPP1R13BQ96KQ4 1090 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 HINFPQ9BQA5 517 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 MAGEB5Q9BZ81 275 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 KIAA1683Q9H0B3 1180 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 DHX35Q9H5Z1 703 aaKnown RBP7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 BCAP29Q9UHQ4 241 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 RAG1P15918 1043 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 SERPINB4P48594 390 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 PPATQ06203 517 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 SF3A3Q12874 501 aaKnown RBP eCLIP7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 ZNF235Q14590 738 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 ZNF484Q5JVG2 852 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 JADE1Q6IE81 842 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 SPOPLQ6IQ16 392 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 FAF2Q96CS3 445 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 KLHL14Q9P2G3 628 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 FAM8A1Q9UBU6 413 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 BAG5Q9UL15 447 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 DISP2A7MBM2 1401 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 H3BRJ5 948 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 NKRFO15226 690 aaKnown RBP eCLIP7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 MAP3K7O43318 606 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 NOL3O60936 208 aaKnown RBP7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 ALDH1A3P47895 512 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 PAPOLAP51003 745 aaKnown RBP7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 HSD17B4P51659 736 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 HSP90AA5PQ58FG0 334 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 TTC23LQ6PF05 361 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 SUGP1Q8IWZ8 645 aaKnown RBP7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 GMCL1P1Q8NEA9 526 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 ZNF564Q8TBZ8 553 aaPredicted RBP7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 YME1L1Q96TA2 773 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 EPAS1Q99814 870 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 COLEC11Q9BWP8 271 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 EPB41L5Q9HCM4 733 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 MAD2L2Q9UI95 211 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 PXDNQ92626 1479 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 SALL1Q9NSC2 1324 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 MYBL1P10243 752 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 BCAR1P56945 870 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 ATP11AP98196 1134 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 FKBP1CQ5VVH2 108 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 CENPUQ71F23 418 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 C10orf67Q8IYJ2 551 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 LRRC8CQ8TDW0 803 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 KAZALD1Q96I82 304 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 GOLPH3LQ9H4A5 285 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 GPRC5DQ9NZD1 345 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 OGFRQ9NZT2 677 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 ARHGAP23Q9P227 1491 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 SLC16A3O15427 465 aaKnown RBP7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 LGR5O75473 907 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 NPTXRO95502 500 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 FGGP02679 453 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 PDGFRBP09619 1106 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 SERPINB6P35237 376 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 SLC26A2P50443 739 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 DEFB115Q30KQ5 88 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 HEATR6Q6AI08 1181 aaKnown RBP7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 KLC3Q6P597 504 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 ALKBH8Q96BT7 664 aaKnown RBP7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 FAM161BQ96MY7 647 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 SLITRK1Q96PX8 696 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 MKNK1Q9BUB5 465 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 NUF2Q9BZD4 464 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 RNF208Q9H0X6 261 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 SENP2Q9HC62 589 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 ATP8A1Q9Y2Q0 1164 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 SNX5Q9Y5X3 404 aa7.31□□□□□ -1.24
SRGAP1-206ENST00000543397 FTLP02792 175 aaPredicted RBP7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 STX1BP61266 288 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 DR1Q01658 176 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 ADCY1Q08828 1119 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 KSR1Q8IVT5 923 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 PYROXD1Q8WU10 500 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 NUP85Q9BW27 656 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 TARS2Q9BW92 718 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 HEMGNQ9BXL5 484 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 TRPV6Q9H1D0 765 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 C17orf75Q9HAS0 396 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 HMX1Q9NP08 348 aaPredicted RBP7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 AASDHPPTQ9NRN7 309 aa7.3□□□□□ -1.24
SRGAP1-206ENST00000543397 MID2Q9UJV3 735 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms