RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 CASTOR2A6NHX0 329 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 PDZK1P1A8MUH7 402 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 POTECB2RU33 542 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 CASP14P31944 242 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 GUCY1A2P33402 732 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 RGS2P41220 211 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 GPR1P46091 355 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 HSD17B4P51659 736 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 SRSF11Q05519 484 aaKnown RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 FNDC3BQ53EP0 1204 aaKnown RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 AIFM3Q96NN9 605 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 LXNQ9BS40 222 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 JPH1Q9HDC5 661 aaPredicted RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 CNOT8Q9UFF9 292 aaKnown RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 CRLS1Q9UJA2 301 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 F5H6K3 240 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 SGSM2O43147 1006 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 FKBP9O95302 570 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 CYP2E1P05181 493 aaPredicted RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 SKIP12755 728 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 FGFR2P21802 821 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 CCR4P51679 360 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 CDH6P55285 790 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 KLRC3Q07444 240 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 CCDC15Q0P6D6 951 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 TMED1Q13445 227 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 LRRC8EQ6NSJ5 796 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 CES5AQ6NT32 575 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 FKBP9P1Q75LS8 142 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 STX19Q8N4C7 294 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 RNASE11Q8TAA1 199 aaKnown RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 UPF3AQ9H1J1 476 aaKnown RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 IL1RL2Q9HB29 575 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 PIH1D3Q9NQM4 214 aaKnown RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 PACSIN2Q9UNF0 486 aaPredicted RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 CAPN7Q9Y6W3 813 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 GRIN2AQ12879 1464 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 SH3BGRLO75368 114 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 PYGMP11217 842 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 ITGB6P18564 788 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 GPC1P35052 558 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 CCL23P55773 120 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 MORF4L2Q15014 288 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 SHROOM1Q2M3G4 852 aaPredicted RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 SEZ6Q53EL9 994 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 IPMKQ8NFU5 416 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 TMC2Q8TDI7 906 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 SPIRE2Q8WWL2 714 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 ZNF560Q96MR9 790 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 ATXN3LQ9H3M9 355 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 RPS6KB2Q9UBS0 482 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 PAIP2BQ9ULR5 123 aaKnown RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 SNX6Q9UNH7 406 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 AURKCQ9UQB9 309 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 BLMP54132 1417 aaPredicted RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 LRRC14BA6NHZ5 514 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 POMCP01189 267 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 OAS2P29728 719 aaKnown RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 COG2Q14746 738 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 EFTUD2Q15029 972 aaKnown RBP eCLIP6.66□□□□□ -1.34
DMD-228ENST00000541735 ZNF697Q5TEC3 545 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 CAPRIN2Q6IMN6 1127 aaKnown RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 SETD3Q86TU7 594 aaPredicted RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 ICA1LQ8NDH6 482 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 COG1Q8WTW3 980 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 RSPH1Q8WYR4 309 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 SLITRK1Q96PX8 696 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 C2orf40Q9H1Z8 148 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 FAN1Q9Y2M0 1017 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 MEI4A8MW99 385 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 CHURC1-FNTBB4DL54 471 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 IPO5O00410 1097 aaKnown RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 B3GAT3O94766 335 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 VTNP04004 478 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 NCAM1P13591 858 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 YWHAQP27348 245 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 CASP1P29466 404 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 SCRN1Q12765 414 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 ZNF211Q13398 564 aaPredicted RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 DEPDC1Q5TB30 811 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 GALNT17Q6IS24 598 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 FGD2Q7Z6J4 655 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 ADGRF4Q8IZF3 695 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 SHCBP1Q8NEM2 672 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 RIN3Q8TB24 985 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 CARD14Q9BXL6 1004 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 ECT2Q9H8V3 914 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 MYOZ2Q9NPC6 264 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 PAPOLBQ9NRJ5 636 aaKnown RBP6.66□□□□□ -1.34
DMD-228ENST00000541735 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.66□□□□□ -1.34
DMD-228ENST00000541735 POLR1DQ9Y2S0 133 aa6.66□□□□□ -1.34
DMD-228ENST00000541735 DNAJC8O75937 253 aaPredicted RBP6.65□□□□□ -1.34
DMD-228ENST00000541735 TJP3O95049 919 aa6.65□□□□□ -1.34
DMD-228ENST00000541735 ALDH9A1P49189 494 aa6.65□□□□□ -1.34
DMD-228ENST00000541735 DGKZQ13574 1117 aa6.65□□□□□ -1.34
DMD-228ENST00000541735 DCAF6Q58WW2 860 aa6.65□□□□□ -1.34
DMD-228ENST00000541735 LDHDQ86WU2 507 aa6.65□□□□□ -1.34
DMD-228ENST00000541735 P2RX5Q93086 422 aa6.65□□□□□ -1.34
DMD-228ENST00000541735 CPB2Q96IY4 423 aa6.65□□□□□ -1.34
DMD-228ENST00000541735 COLEC11Q9BWP8 271 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms