RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 GKAP1Q5VSY0 366 aaPredicted RBP10.23□□□□□ -0.77
CNOT4-212ENST00000541284 C15orf39Q6ZRI6 1047 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 UHMK1Q8TAS1 419 aaKnown RBP10.23□□□□□ -0.77
CNOT4-212ENST00000541284 TAS1R2Q8TE23 839 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 CHURC1Q8WUH1 139 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 MFSD14AQ96MC6 490 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 CDC42EP4Q9H3Q1 356 aaKnown RBP10.23□□□□□ -0.77
CNOT4-212ENST00000541284 EURLQ9NYK6 297 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 LARSQ9P2J5 1176 aaKnown RBP10.23□□□□□ -0.77
CNOT4-212ENST00000541284 MYPNQ86TC9 1320 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 CCDC169A6NNP5 214 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 MGRN1O60291 552 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 CETPP11597 493 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 WNT7BP56706 349 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 ADCY2Q08462 1091 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 TRAF1Q13077 416 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 ZYXQ15942 572 aaKnown RBP10.23□□□□□ -0.77
CNOT4-212ENST00000541284 PCNX4Q63HM2 1172 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 FAM160B2Q86V87 743 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 MAP4K3Q8IVH8 894 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 HVCN1Q96D96 273 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 KIFC3Q9BVG8 833 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 CHST7Q9NS84 486 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 RASAL2Q9UJF2 1139 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 FEM1BQ9UK73 627 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 TPX2Q9ULW0 747 aaKnown RBP10.23□□□□□ -0.77
CNOT4-212ENST00000541284 TELO2Q9Y4R8 837 aa10.23□□□□□ -0.77
CNOT4-212ENST00000541284 O00370 1275 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 CLDN3O15551 220 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 YWHABP31946 246 aaKnown RBP10.22□□□□□ -0.77
CNOT4-212ENST00000541284 QARSP47897 775 aaKnown RBP10.22□□□□□ -0.77
CNOT4-212ENST00000541284 ITIH4Q14624 930 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 SNRNP35Q16560 246 aaKnown RBP10.22□□□□□ -0.77
CNOT4-212ENST00000541284 CLEC16AQ2KHT3 1053 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 TMEM63BQ5T3F8 832 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 C6orf118Q5T5N4 469 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 LLGL2Q6P1M3 1020 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 NSMFQ6X4W1 530 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 TAS1R3Q7RTX0 852 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 SAAL1Q96ER3 474 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 PRMT1Q99873 361 aaKnown RBP10.22□□□□□ -0.77
CNOT4-212ENST00000541284 AGAP1Q9UPQ3 857 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 R3HDM2Q9Y2K5 976 aaKnown RBP10.22□□□□□ -0.77
CNOT4-212ENST00000541284 UMODL1Q5DID0 1318 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 RALGAPA2Q2PPJ7 1873 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 DLATP10515 647 aaKnown RBP10.22□□□□□ -0.77
CNOT4-212ENST00000541284 GBP1P32455 592 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 SLCO1A2P46721 670 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 SNRPFP62306 86 aaKnown RBP10.22□□□□□ -0.77
CNOT4-212ENST00000541284 KLF1Q13351 362 aaPredicted RBP10.22□□□□□ -0.77
CNOT4-212ENST00000541284 DGKZQ13574 1117 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 PLA2G4FQ68DD2 849 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 ACAD10Q6JQN1 1059 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 CGB2Q6NT52 195 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 RNF207Q6ZRF8 634 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 C4orf19Q8IY42 314 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 PLCD3Q8N3E9 789 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 ANKLE1Q8NAG6 615 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 P3H4Q92791 437 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 DDX27Q96GQ7 796 aaKnown RBP10.22□□□□□ -0.77
CNOT4-212ENST00000541284 SGSM3Q96HU1 749 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 ZNF219Q9P2Y4 722 aaPredicted RBP10.22□□□□□ -0.77
CNOT4-212ENST00000541284 UVRAGQ9P2Y5 699 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 TBX20Q9UMR3 447 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 PTPN22Q9Y2R2 807 aa10.22□□□□□ -0.77
CNOT4-212ENST00000541284 PEX3P56589 373 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 GALNTL6Q49A17 601 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 CCDC38Q502W7 563 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 SEL1L2Q5TEA6 688 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 ANO5Q75V66 913 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 SYTL5Q8TDW5 730 aaPredicted RBP10.21□□□□□ -0.77
CNOT4-212ENST00000541284 ZNF516Q92618 1163 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 ZNF653Q96CK0 615 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 TMEM39BQ9GZU3 492 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 TMEM8AQ9HCN3 771 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 WHRNQ9P202 907 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 CTNNAL1Q9UBT7 734 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 SMIM23A6NLE4 172 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 RGS16O15492 202 aaPredicted RBP10.21□□□□□ -0.77
CNOT4-212ENST00000541284 PREPLQ4J6C6 727 aaPredicted RBP10.21□□□□□ -0.77
CNOT4-212ENST00000541284 PPM1KQ8N3J5 372 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 TTLL6Q8N841 843 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 C1orf54Q8WWF1 131 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 ATG4AQ8WYN0 398 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 EHMT1Q9H9B1 1298 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 PDLIM7Q9NR12 457 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 PARP2Q9UGN5 583 aa10.21□□□□□ -0.77
CNOT4-212ENST00000541284 TLDC2A0PJX2 215 aa10.21□□□□□ -0.78
CNOT4-212ENST00000541284 NPTX2P47972 431 aa10.21□□□□□ -0.78
CNOT4-212ENST00000541284 MNAT1P51948 309 aa10.21□□□□□ -0.78
CNOT4-212ENST00000541284 ELF3P78545 371 aaPredicted RBP10.21□□□□□ -0.78
CNOT4-212ENST00000541284 KRT17Q04695 432 aa10.21□□□□□ -0.78
CNOT4-212ENST00000541284 PTK6Q13882 451 aa10.21□□□□□ -0.78
CNOT4-212ENST00000541284 SLMAPQ14BN4 828 aa10.21□□□□□ -0.78
CNOT4-212ENST00000541284 CCDC142Q17RM4 750 aa10.21□□□□□ -0.78
CNOT4-212ENST00000541284 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.21□□□□□ -0.78
CNOT4-212ENST00000541284 CPLX4Q7Z7G2 160 aa10.21□□□□□ -0.78
CNOT4-212ENST00000541284 TAX1BP1Q86VP1 789 aa10.21□□□□□ -0.78
CNOT4-212ENST00000541284 PARP9Q8IXQ6 854 aa10.21□□□□□ -0.78
CNOT4-212ENST00000541284 CYP4X1Q8N118 509 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms