RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 EFNA5P52803 228 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 UVSSAQ2YD98 709 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 PPM1LQ5SGD2 360 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 HAUS3Q68CZ6 603 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 MTSS1LQ765P7 747 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 GRASPQ7Z6J2 395 aaPredicted RBP13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 CEP57Q86XR8 500 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 ADSSL1Q8N142 457 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 DEPTORQ8TB45 409 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 HASPINQ8TF76 798 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 SIT1Q9Y3P8 196 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 MYO15AQ9UKN7 3530 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 CFAP54Q96N23 3096 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 FGFR3P22607 806 aa13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 FOSBP53539 338 aa13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 STARD6P59095 220 aa13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 ST3GAL1Q11201 340 aa13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 RAB33AQ14088 237 aa13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 DCLRE1AQ6PJP8 1040 aa13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 APBB1IPQ7Z5R6 666 aaPredicted RBP13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 NOSTRINQ8IVI9 506 aa13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 KIFAP3Q92845 792 aa13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 SHDQ96IW2 340 aa13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 IFT74Q96LB3 600 aa13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 UROC1Q96N76 676 aa13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 FOXP1Q9H334 677 aaPredicted RBP13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 DLGAP2Q9P1A6 1054 aa13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 RIF1Q5UIP0 2472 aaKnown RBP13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 FAM186AA6NE01 2351 aa13.23□□□□□ -0.29
CBX3P4-202ENST00000540428 DOCK8Q8NF50 2099 aa13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 LMNAP02545 664 aaKnown RBP13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 EDN1P05305 212 aa13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 TRAPPC10P48553 1259 aa13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 EEF1DP3Q658K8 133 aa13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 ERMP1Q7Z2K6 904 aa13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 FGF13Q92913 245 aa13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 FGF14Q92915 247 aa13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 PPP1R10Q96QC0 940 aaKnown RBP13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 LLPHQ9BRT6 129 aaKnown RBP13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 MTRRQ9UBK8 725 aa13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 KCNH3Q9ULD8 1083 aa13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 BACE2Q9Y5Z0 518 aa13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 STK24Q9Y6E0 443 aa13.22□□□□□ -0.29
CBX3P4-202ENST00000540428 MTCL1Q9Y4B5 1905 aaKnown RBP13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 PHLPP2Q6ZVD8 1323 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 CCL16O15467 120 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 ADAM12O43184 909 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 TRAPPC3O43617 180 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 B3GAT3O94766 335 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 GPC5P78333 572 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 NTHL1P78549 312 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 GUCY1B3Q02153 619 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 ZNF174Q15697 407 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 TTC38Q5R3I4 469 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 AXDND1Q5T1B0 1012 aaPredicted RBP13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 ATF7IP2Q5U623 682 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 ZC3H14Q6PJT7 736 aaKnown RBP13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 PARM1Q6UWI2 310 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 ANKS3Q6ZW76 656 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 C1orf210Q8IVY1 113 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 PJA1Q8NG27 643 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 SLC7A14Q8TBB6 771 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 BORCS6Q96GS4 357 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 C8orf76Q96K31 380 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 RPP25Q9BUL9 199 aaKnown RBP13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 CXCL16Q9H2A7 254 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 TNFSF13BQ9Y275 285 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 GDAQ9Y2T3 454 aa13.21□□□□□ -0.29
CBX3P4-202ENST00000540428 K7ERI5 159 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 NEFLP07196 543 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 DCNP07585 359 aaKnown RBP13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 LIG1P18858 919 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 OR1D2P34982 312 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 CCT6AP40227 531 aaKnown RBP13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 ID4P47928 161 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 CLCNKBP51801 687 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 HMGN5P82970 282 aaKnown RBP13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 PFKPQ01813 784 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 PRKCQQ04759 706 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 PDIA5Q14554 519 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 UPP1Q16831 310 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 XKR4Q5GH76 650 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 SPECC1Q5M775 1068 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 NT5DC1Q5TFE4 455 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 RSPO2Q6UXX9 243 aaPredicted RBP13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 FBXO18Q8NFZ0 1043 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 DDX27Q96GQ7 796 aaKnown RBP13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 DDX23Q9BUQ8 820 aaKnown RBP13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 KIFC3Q9BVG8 833 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 OSBPL6Q9BZF3 934 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 BHMT2Q9H2M3 363 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 AVENQ9NQS1 362 aaPredicted RBP13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 TOPORSQ9NS56 1045 aaPredicted RBP13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 POLIQ9UNA4 740 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 LIMCH1Q9UPQ0 1083 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 USP20Q9Y2K6 914 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 CDY1Q9Y6F8 540 aa13.2□□□□□ -0.3
CBX3P4-202ENST00000540428 KANSL1LA0AUZ9 987 aa13.19□□□□□ -0.3
CBX3P4-202ENST00000540428 SP9P0CG40 484 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms