RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 SLC39A2Q9NP94 309 aa14.66□□□□□ -0.06
PRPF19-204ENST00000539960 MEFVO15553 781 aaPredicted RBP14.65□□□□□ -0.06
PRPF19-204ENST00000539960 FAM189A1O60320 539 aa14.65□□□□□ -0.06
PRPF19-204ENST00000539960 GADD45BO75293 160 aaPredicted RBP14.65□□□□□ -0.06
PRPF19-204ENST00000539960 DPYDQ12882 1025 aa14.65□□□□□ -0.06
PRPF19-204ENST00000539960 NAB2Q15742 525 aa14.65□□□□□ -0.06
PRPF19-204ENST00000539960 KMT5BQ4FZB7 885 aa14.65□□□□□ -0.06
PRPF19-204ENST00000539960 PDE12Q6L8Q7 609 aaKnown RBP14.65□□□□□ -0.06
PRPF19-204ENST00000539960 BCL7CQ8WUZ0 217 aaPredicted RBP14.65□□□□□ -0.06
PRPF19-204ENST00000539960 SCFD1Q8WVM8 642 aa14.65□□□□□ -0.06
PRPF19-204ENST00000539960 SNX27Q96L92 541 aa14.65□□□□□ -0.06
PRPF19-204ENST00000539960 TIGD1Q96MW7 591 aa14.65□□□□□ -0.06
PRPF19-204ENST00000539960 PPP1R10Q96QC0 940 aaKnown RBP14.65□□□□□ -0.06
PRPF19-204ENST00000539960 COLEC11Q9BWP8 271 aa14.65□□□□□ -0.06
PRPF19-204ENST00000539960 TLR9Q9NR96 1032 aa14.65□□□□□ -0.06
PRPF19-204ENST00000539960 EXOC1Q9NV70 894 aa14.65□□□□□ -0.06
PRPF19-204ENST00000539960 AGO2Q9UKV8 859 aaKnown RBP14.65□□□□□ -0.06
PRPF19-204ENST00000539960 PRG3Q9Y2Y8 225 aaPredicted RBP14.65□□□□□ -0.06
PRPF19-204ENST00000539960 PRRC2BQ5JSZ5 2229 aaKnown RBP14.65□□□□□ -0.06
PRPF19-204ENST00000539960 RALGAPA2Q2PPJ7 1873 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 TTC26A0AVF1 554 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 RPN1P04843 607 aaKnown RBP14.64□□□□□ -0.07
PRPF19-204ENST00000539960 ADRB2P07550 413 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 PRR29P0C7W0 189 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 GARTP22102 1010 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 IRS1P35568 1242 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 TNFSF9P41273 254 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 TIGD5Q53EQ6 642 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 GLRA4Q5JXX5 417 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 ZBTB41Q5SVQ8 909 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 CLEC17AQ6ZS10 378 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 TMC7Q7Z402 723 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 POMGNT1Q8WZA1 660 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 ZMAT2Q96NC0 199 aaKnown RBP14.64□□□□□ -0.07
PRPF19-204ENST00000539960 NSUN3Q9H649 340 aaKnown RBP14.64□□□□□ -0.07
PRPF19-204ENST00000539960 RPF1Q9H9Y2 349 aaKnown RBP14.64□□□□□ -0.07
PRPF19-204ENST00000539960 CNTN3Q9P232 1028 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 CPSF3Q9UKF6 684 aaKnown RBP14.64□□□□□ -0.07
PRPF19-204ENST00000539960 CDH23Q9H251 3354 aa14.64□□□□□ -0.07
PRPF19-204ENST00000539960 LACTBL1A8MY62 500 aa14.63□□□□□ -0.07
PRPF19-204ENST00000539960 FSCN2O14926 492 aa14.63□□□□□ -0.07
PRPF19-204ENST00000539960 CXCL8P10145 99 aa14.63□□□□□ -0.07
PRPF19-204ENST00000539960 ACOT2P49753 483 aa14.63□□□□□ -0.07
PRPF19-204ENST00000539960 POU5F1Q01860 360 aaKnown RBP14.63□□□□□ -0.07
PRPF19-204ENST00000539960 STK4Q13043 487 aa14.63□□□□□ -0.07
PRPF19-204ENST00000539960 ENOX2Q16206 610 aaKnown RBP14.63□□□□□ -0.07
PRPF19-204ENST00000539960 BMT2Q1RMZ1 405 aa14.63□□□□□ -0.07
PRPF19-204ENST00000539960 TCEAL5Q5H9L2 206 aa14.63□□□□□ -0.07
PRPF19-204ENST00000539960 VPS52Q8N1B4 723 aa14.63□□□□□ -0.07
PRPF19-204ENST00000539960 RABGGTAQ92696 567 aa14.63□□□□□ -0.07
PRPF19-204ENST00000539960 CCDC47Q96A33 483 aaKnown RBP14.63□□□□□ -0.07
PRPF19-204ENST00000539960 NGRNQ9NPE2 291 aaKnown RBP14.63□□□□□ -0.07
PRPF19-204ENST00000539960 SLC38A7Q9NVC3 462 aa14.63□□□□□ -0.07
PRPF19-204ENST00000539960 MARCH5Q9NX47 278 aa14.63□□□□□ -0.07
PRPF19-204ENST00000539960 STK39Q9UEW8 545 aa14.63□□□□□ -0.07
PRPF19-204ENST00000539960 NLRC5Q86WI3 1866 aa14.63□□□□□ -0.07
PRPF19-204ENST00000539960 CASTOR2A6NHX0 329 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 F8W810 466 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 TGFB1I1O43294 461 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 PRPF40AO75400 957 aaKnown RBP14.62□□□□□ -0.07
PRPF19-204ENST00000539960 TADA2AO75478 443 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 RHOBTB3O94955 611 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 CSPG5O95196 566 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 CXCL14O95715 111 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 EFEMP2O95967 443 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 LDHAP00338 332 aaKnown RBP14.62□□□□□ -0.07
PRPF19-204ENST00000539960 UBE2HP62256 183 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 SNRPFP62306 86 aaKnown RBP14.62□□□□□ -0.07
PRPF19-204ENST00000539960 HSP90AA2PQ14568 343 aaPredicted RBP14.62□□□□□ -0.07
PRPF19-204ENST00000539960 BMS1Q14692 1282 aaKnown RBP14.62□□□□□ -0.07
PRPF19-204ENST00000539960 KCNB1Q14721 858 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 SKIV2LQ15477 1246 aaKnown RBP14.62□□□□□ -0.07
PRPF19-204ENST00000539960 ZBTB6Q15916 424 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 KNOP1Q1ED39 458 aaKnown RBP14.62□□□□□ -0.07
PRPF19-204ENST00000539960 DCLRE1AQ6PJP8 1040 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 CRELD2Q6UXH1 353 aaPredicted RBP14.62□□□□□ -0.07
PRPF19-204ENST00000539960 CD302Q8IX05 232 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 NELFCDQ8IXH7 590 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 ELOA2Q8IYF1 753 aaPredicted RBP14.62□□□□□ -0.07
PRPF19-204ENST00000539960 MRPL43Q8N983 215 aaKnown RBP14.62□□□□□ -0.07
PRPF19-204ENST00000539960 DDX27Q96GQ7 796 aaKnown RBP14.62□□□□□ -0.07
PRPF19-204ENST00000539960 UROC1Q96N76 676 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 TSPAN18Q96SJ8 248 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 TCF25Q9BQ70 676 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 PAAF1Q9BRP4 392 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 CBWD1Q9BRT8 395 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 VN1R3Q9BXE9 311 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 CACNG4Q9UBN1 327 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 HOOK1Q9UJC3 728 aaKnown RBP14.62□□□□□ -0.07
PRPF19-204ENST00000539960 PCDHGC5Q9Y5F6 944 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 UBE4BO95155 1302 aa14.62□□□□□ -0.07
PRPF19-204ENST00000539960 COL6A3P12111 3177 aa14.61□□□□□ -0.07
PRPF19-204ENST00000539960 KIAA0391O15091 583 aaKnown RBP14.61□□□□□ -0.07
PRPF19-204ENST00000539960 NCK2O43639 380 aa14.61□□□□□ -0.07
PRPF19-204ENST00000539960 EXTL3O43909 919 aa14.61□□□□□ -0.07
PRPF19-204ENST00000539960 CTSAP10619 480 aa14.61□□□□□ -0.07
PRPF19-204ENST00000539960 PPP2R3AQ06190 1150 aa14.61□□□□□ -0.07
PRPF19-204ENST00000539960 SOX4Q06945 474 aaPredicted RBP14.61□□□□□ -0.07
PRPF19-204ENST00000539960 PNOCQ13519 176 aa14.61□□□□□ -0.07
PRPF19-204ENST00000539960 UPP1Q16831 310 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms