RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 CCDC97Q96F63 343 aaPredicted RBP9.93□□□□□ -0.82
MRE11-208ENST00000538923 MBOAT7Q96N66 472 aa9.93□□□□□ -0.82
MRE11-208ENST00000538923 KLHL5Q96PQ7 755 aa9.93□□□□□ -0.82
MRE11-208ENST00000538923 FBXL21Q9UKT6 434 aa9.93□□□□□ -0.82
MRE11-208ENST00000538923 DUSP12Q9UNI6 340 aa9.93□□□□□ -0.82
MRE11-208ENST00000538923 FAN1Q9Y2M0 1017 aa9.93□□□□□ -0.82
MRE11-208ENST00000538923 CFAP54Q96N23 3096 aa9.93□□□□□ -0.82
MRE11-208ENST00000538923 NRP1O14786 923 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 B4GALT3O60512 393 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 DDHD2O94830 711 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 REC8O95072 547 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 DEXIO95424 95 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 POMCP01189 267 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 SOD2P04179 222 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 URODP06132 367 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 P4HBP07237 508 aaKnown RBP9.92□□□□□ -0.82
MRE11-208ENST00000538923 SRGAP2CP0DJJ0 459 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 NCLP19338 710 aaKnown RBP9.92□□□□□ -0.82
MRE11-208ENST00000538923 CLN3Q13286 438 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 PPP2R5CQ13362 524 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 PCBP1Q15365 356 aaKnown RBP eCLIP9.92□□□□□ -0.82
MRE11-208ENST00000538923 CWF19L1Q69YN2 538 aaKnown RBP9.92□□□□□ -0.82
MRE11-208ENST00000538923 CPLX2Q6PUV4 134 aaKnown RBP9.92□□□□□ -0.82
MRE11-208ENST00000538923 RUFY3Q7L099 469 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 KRT25Q7Z3Z0 450 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 FRMD5Q7Z6J6 570 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 CMASQ8NFW8 434 aaPredicted RBP9.92□□□□□ -0.82
MRE11-208ENST00000538923 STAMQ92783 540 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 CEP170P1Q96L14 293 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 FAM20AQ96MK3 541 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 RPS6KC1Q96S38 1066 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 RTP3Q9BQQ7 232 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 SLKQ9H2G2 1235 aaPredicted RBP9.92□□□□□ -0.82
MRE11-208ENST00000538923 DHX33Q9H6R0 707 aaKnown RBP9.92□□□□□ -0.82
MRE11-208ENST00000538923 KCNK12Q9HB15 430 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 IGSF9Q9P2J2 1179 aa9.92□□□□□ -0.82
MRE11-208ENST00000538923 CCDC195A0A1B0GUA6 201 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 FIGNL2A6NMB9 653 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 SOBPA7XYQ1 873 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 EML1O00423 815 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 C2CD2LO14523 706 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 ASAP2O43150 1006 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 SLC37A4O43826 429 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 ERLIN2O94905 339 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 ITGA4P13612 1032 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 GCFC2P16383 781 aaKnown RBP9.91□□□□□ -0.82
MRE11-208ENST00000538923 NPR3P17342 541 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 AXLP30530 894 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 HOXA11P31270 313 aaPredicted RBP9.91□□□□□ -0.82
MRE11-208ENST00000538923 AFF1P51825 1210 aaKnown RBP9.91□□□□□ -0.82
MRE11-208ENST00000538923 AK2P54819 239 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 NPEPPSP55786 919 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 NCBP1Q09161 790 aaKnown RBP9.91□□□□□ -0.82
MRE11-208ENST00000538923 LAMTOR4Q0VGL1 99 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 TOB2Q14106 344 aaPredicted RBP9.91□□□□□ -0.82
MRE11-208ENST00000538923 NPY5RQ15761 445 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 INF2Q27J81 1249 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 UBXN11Q5T124 520 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 PPP4R3AQ6IN85 833 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 NOTUMQ6P988 496 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 OTUD6AQ7L8S5 288 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 CCDC105Q8IYK2 499 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 SIX5Q8N196 739 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 FEZF2Q8TBJ5 459 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 TCP11Q8WWU5 503 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 TMEM143Q96AN5 459 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 ZNF274Q96GC6 653 aaPredicted RBP9.91□□□□□ -0.82
MRE11-208ENST00000538923 NAP1L4Q99733 375 aaKnown RBP9.91□□□□□ -0.82
MRE11-208ENST00000538923 HERC2P3Q9BVR0 1158 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 RHOBTB2Q9BYZ6 727 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 MINDY3Q9H8M7 445 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 KCNMB3Q9NPA1 279 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 MAN1C1Q9NR34 630 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 VAV3Q9UKW4 847 aa9.91□□□□□ -0.82
MRE11-208ENST00000538923 MYO15AQ9UKN7 3530 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 LOXHD1Q8IVV2 1947 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 CCDC194A0A1B0GVG4 234 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 ARL5CA6NH57 179 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 TBX3O15119 743 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 INPPL1O15357 1258 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 TEX28O15482 410 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 PI15O43692 258 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 STAU1O95793 577 aaKnown RBP9.9□□□□□ -0.82
MRE11-208ENST00000538923 GLUD1P00367 558 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 C1RP00736 705 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 YWHABP31946 246 aaKnown RBP9.9□□□□□ -0.82
MRE11-208ENST00000538923 OR1G1P47890 313 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 GLUD2P49448 558 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 MXD4Q14582 209 aaPredicted RBP9.9□□□□□ -0.82
MRE11-208ENST00000538923 EMC2Q15006 297 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 ANGPT1Q15389 498 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 NEK8Q86SG6 692 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 C4orf19Q8IY42 314 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 COLGALT2Q8IYK4 626 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 ADSSL1Q8N142 457 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 DTWD2Q8NBA8 298 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 RNF149Q8NC42 400 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 SMG8Q8ND04 991 aaKnown RBP9.9□□□□□ -0.82
MRE11-208ENST00000538923 HDAC7Q8WUI4 952 aa9.9□□□□□ -0.82
MRE11-208ENST00000538923 NXPE3Q969Y0 559 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms