RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 VSNL1P62760 191 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 PSMD6Q15008 389 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 ZACNQ401N2 412 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 SAPCD2Q86UD0 394 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 OR6J1Q8NGC5 347 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 RABGGTAQ92696 567 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 BTBD6Q96KE9 485 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 IFT122Q9HBG6 1241 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 VTA1Q9NP79 307 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 SIP14410 1827 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 H0YCG3 227 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 FTLP02792 175 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-205ENST00000538545 C15orf39Q6ZRI6 1047 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 FAM71AQ8IYT1 594 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 SHC3Q92529 594 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 MRPL4Q9BYD3 311 aaKnown RBP15.22■□□□□ 0.03
ACTN1-205ENST00000538545 TMEM134Q9H6X4 195 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 NOCTQ9UK39 431 aaKnown RBP15.22■□□□□ 0.03
ACTN1-205ENST00000538545 SLC45A1Q9Y2W3 748 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 PCDHGC5Q9Y5F6 944 aa15.22■□□□□ 0.03
ACTN1-205ENST00000538545 ABLIM1O14639 778 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 CTGFP29279 349 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 BEX3Q00994 111 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 SLC7A5Q01650 507 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 ZNF394Q53GI3 561 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 ZBTB8OSQ8IWT0 167 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 GPR161Q8N6U8 529 aaKnown RBP15.21■□□□□ 0.03
ACTN1-205ENST00000538545 TPCN2Q8NHX9 752 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 PPTC7Q8NI37 304 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 FAM49AQ9H0Q0 323 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-205ENST00000538545 LUC7LQ9NQ29 371 aaKnown RBP15.21■□□□□ 0.03
ACTN1-205ENST00000538545 NUB1Q9Y5A7 615 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 TMEM110-MUSTN1A8MSY1 372 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 TOM1L1O75674 476 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 PIGRP01833 764 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 MMP3P08254 477 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 CYP11B1P15538 503 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 MFAP3P55082 362 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 FMO1Q01740 532 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 MXD4Q14582 209 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-205ENST00000538545 ZNF568Q3ZCX4 644 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 OLFML2BQ68BL8 750 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 CDCA2Q69YH5 1023 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-205ENST00000538545 DAAM2Q86T65 1068 aa15.21■□□□□ 0.03
ACTN1-205ENST00000538545 RNF10Q8N5U6 811 aaKnown RBP15.21■□□□□ 0.03
ACTN1-205ENST00000538545 GPR25O00155 361 aa15.21■□□□□ 0.02
ACTN1-205ENST00000538545 BUB1BO60566 1050 aaPredicted RBP15.21■□□□□ 0.02
ACTN1-205ENST00000538545 CXCL8P10145 99 aa15.21■□□□□ 0.02
ACTN1-205ENST00000538545 TFAMQ00059 246 aaKnown RBP15.21■□□□□ 0.02
ACTN1-205ENST00000538545 MBTD1Q05BQ5 628 aa15.21■□□□□ 0.02
ACTN1-205ENST00000538545 MEI1Q5TIA1 1274 aa15.21■□□□□ 0.02
ACTN1-205ENST00000538545 PASD1Q8IV76 773 aa15.21■□□□□ 0.02
ACTN1-205ENST00000538545 LRRC57Q8N9N7 239 aa15.21■□□□□ 0.02
ACTN1-205ENST00000538545 GTF3C2Q8WUA4 911 aaPredicted RBP15.21■□□□□ 0.02
ACTN1-205ENST00000538545 SCLT1Q96NL6 688 aa15.21■□□□□ 0.02
ACTN1-205ENST00000538545 CXCL16Q9H2A7 254 aa15.21■□□□□ 0.02
ACTN1-205ENST00000538545 PDCL3Q9H2J4 239 aa15.21■□□□□ 0.02
ACTN1-205ENST00000538545 ST7Q9NRC1 585 aa15.21■□□□□ 0.02
ACTN1-205ENST00000538545 TRIP11Q15643 1979 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 KCNK3O14649 394 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 PHACTR2O75167 634 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 HIC1Q14526 733 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 LLGL1Q15334 1064 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 KIZQ2M2Z5 673 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 DUSP28Q4G0W2 176 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 MARCH8Q5T0T0 291 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 ATF7IP2Q5U623 682 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 SLFN12LQ6IEE8 588 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 CHADLQ6NUI6 762 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 SCARA5Q6ZMJ2 495 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 TCP11Q8WWU5 503 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 ARHGAP39Q9C0H5 1083 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 ABHD16BQ9H3Z7 469 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 C1orf112Q9NSG2 853 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 ZSWIM8A7E2V4 1837 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 SASH3O75995 380 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 ZNF200P98182 395 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-205ENST00000538545 TNFAIP2Q03169 654 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 PAXIP1Q6ZW49 1069 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-205ENST00000538545 EFCAB13Q8IY85 973 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 CDHR5Q9HBB8 845 aa15.2■□□□□ 0.02
ACTN1-205ENST00000538545 RBM12Q9NTZ6 932 aaKnown RBP15.2■□□□□ 0.02
ACTN1-205ENST00000538545 LAMA2P24043 3122 aaKnown RBP15.19■□□□□ 0.02
ACTN1-205ENST00000538545 MEFVO15553 781 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-205ENST00000538545 CD58P19256 250 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 MAPK4P31152 587 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 GUCY2FP51841 1108 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 PTENP60484 403 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 TMEM270Q6UE05 265 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 ABRAQ8N0Z2 381 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 NLRP7Q8WX94 980 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 CTNNBL1Q8WYA6 563 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-205ENST00000538545 MYL6P60660 151 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 PPFIA1Q13136 1202 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 NCOA4Q13772 614 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 GRIK4Q16099 956 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 CCDC181Q5TID7 509 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 AADACL2Q6P093 401 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 MTHFD1LQ6UB35 978 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 SPATA4Q8NEY3 305 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms