RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 FAM212AQ96EL1 285 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 TRPV6Q9H1D0 765 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 PLAGL2Q9UPG8 496 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 A0A0U1RQG5 324 aaPredicted RBP21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 B4GALT4O60513 344 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 LBX1P52954 281 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 ZACNQ401N2 412 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 E4F1Q66K89 784 aaPredicted RBP21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 SLC27A1Q6PCB7 646 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 FAM228AQ86W67 206 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 CGRRF1Q99675 332 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 FBXL5Q9UKA1 691 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 AJAP1Q9UKB5 411 aaPredicted RBP21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 PIN4Q9Y237 131 aaKnown RBP21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 ANK1P16157 1881 aa21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 ARVCFO00192 962 aa21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 MEFVO15553 781 aaPredicted RBP21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 C4BPAP04003 597 aaKnown RBP21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 CLTAP09496 248 aa21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 AXLP30530 894 aa21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 MEA1Q16626 185 aa21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 TRIM71Q2Q1W2 868 aaKnown RBP21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 PHLDB3Q6NSJ2 640 aa21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 C17orf53Q8N3J3 647 aaPredicted RBP21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 FBXL13Q8NEE6 735 aa21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 OR5B17Q8NGF7 314 aa21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 CHP1Q99653 195 aa21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 NAA15Q9BXJ9 866 aaKnown RBP21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 EIF2AQ9BY44 585 aaKnown RBP21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 RPF1Q9H9Y2 349 aaKnown RBP21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 APEX2Q9UBZ4 518 aa21.1■□□□□ 0.97
EFCAB11-202ENST00000538485 SOWAHDA6NJG2 315 aa21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 ARHGAP6O43182 974 aa21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 NPTXRO95502 500 aa21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 HNRNPH3P31942 346 aaKnown RBP21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 TSR1Q2NL82 804 aaKnown RBP21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 DCAF4L1Q3SXM0 396 aa21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 TDRD10Q5VZ19 366 aaKnown RBP21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 PDXDC1Q6P996 788 aa21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 FBXO46Q6PJ61 603 aaPredicted RBP21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 OSBPL7Q9BZF2 842 aa21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 RAB20Q9NX57 234 aa21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 IQCEQ6IPM2 695 aa21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 WDR49Q8IV35 697 aa21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 ZNF333Q96JL9 665 aa21.09■□□□□ 0.97
EFCAB11-202ENST00000538485 RPS6KA5O75582 802 aa21.08■□□□□ 0.97
EFCAB11-202ENST00000538485 MTF1Q14872 753 aa21.08■□□□□ 0.97
EFCAB11-202ENST00000538485 SURF1Q15526 300 aa21.08■□□□□ 0.97
EFCAB11-202ENST00000538485 SLC10A6Q3KNW5 377 aa21.08■□□□□ 0.97
EFCAB11-202ENST00000538485 GPIHBP1Q8IV16 184 aa21.08■□□□□ 0.97
EFCAB11-202ENST00000538485 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.08■□□□□ 0.973e-13■■■■■ 167.7
EFCAB11-202ENST00000538485 ST3GAL5Q9UNP4 418 aa21.08■□□□□ 0.97
EFCAB11-202ENST00000538485 GRM5P41594 1212 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 CDK7P50613 346 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 POU5F1Q01860 360 aaKnown RBP21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 BIRC3Q13489 604 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 RAPGEF1Q13905 1077 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 KYAT1Q16773 422 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 CYP26C1Q6V0L0 522 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 RAD9BQ6WBX8 426 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 TMTC1Q8IUR5 882 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 EFCAB13Q8IY85 973 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 ACAP3Q96P50 834 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 AGO3Q9H9G7 860 aaKnown RBP21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 DNAJC12Q9UKB3 198 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 HES2Q9Y543 173 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 CITO14578 2027 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 LACTBL1A8MY62 500 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 IL18RAPO95256 599 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 VNN1O95497 513 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 JAM2P57087 298 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 NFX1Q12986 1120 aaKnown RBP21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 ZNF618Q5T7W0 954 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 SCARA3Q6AZY7 606 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 ARHGEF19Q8IW93 802 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 ELMO3Q96BJ8 720 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 SPAG5Q96R06 1193 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 MTMR12Q9C0I1 747 aa21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 NUCKS1Q9H1E3 243 aaKnown RBP21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 ZNHIT6Q9NWK9 470 aaKnown RBP21.07■□□□□ 0.96
EFCAB11-202ENST00000538485 MROH7Q68CQ1 1323 aa21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 HSPA1AP0DMV8 641 aaKnown RBP21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 HSPA1BP0DMV9 641 aaKnown RBP21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 KCNJ6P48051 423 aa21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 AP3M2P53677 418 aa21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 FBXO47Q5MNV8 452 aa21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 UBXN11Q5T124 520 aa21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 APBB1IPQ7Z5R6 666 aaPredicted RBP21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 SYN2Q92777 582 aaPredicted RBP21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 PI4K2AQ9BTU6 479 aa21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 TRIM6Q9C030 488 aaPredicted RBP21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 CRISPLD2Q9H0B8 497 aa21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 NXF3Q9H4D5 531 aaKnown RBP21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 SNTG2Q9NY99 539 aa21.06■□□□□ 0.96
EFCAB11-202ENST00000538485 HLA-DRAP01903 254 aa21.05■□□□□ 0.96
EFCAB11-202ENST00000538485 CKBP12277 381 aa21.05■□□□□ 0.96
EFCAB11-202ENST00000538485 TFAMQ00059 246 aaKnown RBP21.05■□□□□ 0.96
EFCAB11-202ENST00000538485 DUOXA2Q1HG44 320 aa21.05■□□□□ 0.96
EFCAB11-202ENST00000538485 FAM26DQ5JW98 314 aa21.05■□□□□ 0.96
EFCAB11-202ENST00000538485 SFMBT2Q5VUG0 894 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms