RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 F2P00734 622 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 DARSP14868 501 aaKnown RBP7.8□□□□□ -1.16
MSH6-209ENST00000538136 SLC26A2P50443 739 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 VAMP7P51809 220 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 NLRP12P59046 1061 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 HIC1Q14526 733 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 SPA17Q15506 151 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 LHX8Q68G74 356 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 MLKLQ8NB16 471 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 ATAD1Q8NBU5 361 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 DHX38Q92620 1227 aaKnown RBP7.8□□□□□ -1.16
MSH6-209ENST00000538136 XPO4Q9C0E2 1151 aaKnown RBP7.8□□□□□ -1.16
MSH6-209ENST00000538136 ADAMTS5Q9UNA0 930 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 MROH7Q68CQ1 1323 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 IGSF9BQ9UPX0 1349 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 TOM1L1O75674 476 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 CKMP06732 381 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 HOXC6P09630 235 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 ACO1P21399 889 aaKnown RBP7.79□□□□□ -1.16
MSH6-209ENST00000538136 TNFAIP3P21580 790 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 MYL6P60660 151 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 PPARDQ03181 441 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 PPP2R5CQ13362 524 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 IRF5Q13568 498 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 PPP2R5DQ14738 602 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 ARHGAP29Q52LW3 1261 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 SLFN12LQ6IEE8 588 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 OR6B2Q6IFH4 312 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 IQCEQ6IPM2 695 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 GPD1LQ8N335 351 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 FGD4Q96M96 766 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 POLR3CQ9BUI4 534 aaPredicted RBP7.79□□□□□ -1.16
MSH6-209ENST00000538136 GRPEL1Q9HAV7 217 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 PRDM10Q9NQV6 1147 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 LUC7L2Q9Y383 392 aaKnown RBP7.79□□□□□ -1.16
MSH6-209ENST00000538136 PLIN4Q96Q06 1357 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 F5H423 210 aaPredicted RBP7.79□□□□□ -1.16
MSH6-209ENST00000538136 ENDOD1O94919 500 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 NFICP08651 508 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 CYP3A4P08684 503 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 IQCF3P0C7M6 154 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 PMS1P54277 932 aaKnown RBP7.79□□□□□ -1.16
MSH6-209ENST00000538136 TSPY1Q01534 308 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 KCNH2Q12809 1159 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 NCOA4Q13772 614 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 VPS36Q86VN1 386 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 FAM228AQ86W67 206 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 C17orf53Q8N3J3 647 aaPredicted RBP7.79□□□□□ -1.16
MSH6-209ENST00000538136 CAGE1Q8TC20 777 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 HPDLQ96IR7 371 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 CCDC42Q96M95 316 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 GSDMAQ96QA5 445 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 PAAF1Q9BRP4 392 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 DNAJB4Q9UDY4 337 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 GNEQ9Y223 722 aaKnown RBP7.79□□□□□ -1.16
MSH6-209ENST00000538136 IPPQ9Y573 584 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 STK24Q9Y6E0 443 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 CYB561D2O14569 222 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 GGCXP38435 758 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 KLK7P49862 253 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 RBM10P98175 930 aaKnown RBP7.79□□□□□ -1.16
MSH6-209ENST00000538136 NOMO2Q5JPE7 1267 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 ZNF658Q5TYW1 1059 aaPredicted RBP7.79□□□□□ -1.16
MSH6-209ENST00000538136 JADE1Q6IE81 842 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 SLC27A1Q6PCB7 646 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 RSPH1Q8WYR4 309 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 LPIN3Q9BQK8 851 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 C17orf80Q9BSJ5 609 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 CDT1Q9H211 546 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 SYNPO2Q9UMS6 1093 aa7.79□□□□□ -1.16
MSH6-209ENST00000538136 COLQQ9Y215 455 aaPredicted RBP7.79□□□□□ -1.16
MSH6-209ENST00000538136 A0A1W2PQ27 194 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 A0A1W2PQ64 194 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 A0A1W2PQD8 194 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 DAPK3O43293 454 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 ADAMTS4O75173 837 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 MAFO75444 373 aaPredicted RBP7.78□□□□□ -1.16
MSH6-209ENST00000538136 P4HA1P13674 534 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 SLC9A1P19634 815 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 PRPHP41219 470 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 NAMPTP43490 491 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 FAAP100Q0VG06 881 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 PGBD3Q8N328 593 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 DEFB123Q8N688 67 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 FLCNQ8NFG4 579 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 GANCQ8TET4 914 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 SPIRE2Q8WWL2 714 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 DESI2Q9BSY9 194 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 KIF9Q9HAQ2 790 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 NGRNQ9NPE2 291 aaKnown RBP7.78□□□□□ -1.16
MSH6-209ENST00000538136 AGPAT3Q9NRZ7 376 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 DPP3Q9NY33 737 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 STIM2Q9P246 746 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 TUBGCP4Q9UGJ1 667 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 MYH1P12882 1939 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 TUBGCP6Q96RT7 1819 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 TRIM43BA6NCK2 446 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 ASAP2O43150 1006 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 GAS2O43903 313 aaKnown RBP7.78□□□□□ -1.16
MSH6-209ENST00000538136 C22orf31O95567 290 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms