RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 CFAP100Q494V2 611 aa3.63□□□□□ -1.83
SKA3-207ENST00000536239 LYSMD2Q8IV50 215 aa3.63□□□□□ -1.83
SKA3-207ENST00000536239 SLC41A1Q8IVJ1 513 aa3.63□□□□□ -1.83
SKA3-207ENST00000536239 LNX2Q8N448 690 aa3.63□□□□□ -1.83
SKA3-207ENST00000536239 EFHBQ8N7U6 833 aa3.63□□□□□ -1.83
SKA3-207ENST00000536239 RSAD2Q8WXG1 361 aa3.63□□□□□ -1.83
SKA3-207ENST00000536239 PTCD3Q96EY7 689 aaKnown RBP3.63□□□□□ -1.83
SKA3-207ENST00000536239 FUBP3Q96I24 572 aaKnown RBP eCLIP3.63□□□□□ -1.83
SKA3-207ENST00000536239 ORAI3Q9BRQ5 295 aa3.63□□□□□ -1.83
SKA3-207ENST00000536239 REXO4Q9GZR2 422 aaKnown RBP3.63□□□□□ -1.83
SKA3-207ENST00000536239 RNPEPQ9H4A4 650 aa3.63□□□□□ -1.83
SKA3-207ENST00000536239 PNPLA7Q6ZV29 1317 aa3.63□□□□□ -1.83
SKA3-207ENST00000536239 MANSC4A6NHS7 340 aaPredicted RBP3.62□□□□□ -1.83
SKA3-207ENST00000536239 TRIM38O00635 465 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 TGM5O43548 720 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 SNRPA1P09661 255 aaKnown RBP3.62□□□□□ -1.83
SKA3-207ENST00000536239 WT1P19544 449 aaPredicted RBP3.62□□□□□ -1.83
SKA3-207ENST00000536239 ATP2B1P20020 1258 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 SDSP20132 328 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 FGFR4P22455 802 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 CTSSP25774 331 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 CYP2A13Q16696 494 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 GPR158Q5T848 1215 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 C11orf87Q6NUJ2 197 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 THNSL2Q86YJ6 484 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 HASPINQ8TF76 798 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 SARAFQ96BY9 339 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 SRPK1Q96SB4 655 aaKnown RBP3.62□□□□□ -1.83
SKA3-207ENST00000536239 UNKLQ9H9P5 680 aaKnown RBP3.62□□□□□ -1.83
SKA3-207ENST00000536239 KCNE5Q9UJ90 142 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 ENTPD2Q9Y5L3 495 aa3.62□□□□□ -1.83
SKA3-207ENST00000536239 CCDC78A2IDD5 438 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 LCHNA4D1U4 455 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 GPANK1O95872 356 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 BMP15O95972 392 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 F2P00734 622 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 PRKCGP05129 697 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 GPD1P21695 349 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 ITPKBP27987 946 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 VAV2P52735 878 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 SSBP2P81877 361 aaPredicted RBP3.61□□□□□ -1.83
SKA3-207ENST00000536239 TRIM25Q14258 630 aaKnown RBP3.61□□□□□ -1.83
SKA3-207ENST00000536239 CRELD2Q6UXH1 353 aaPredicted RBP3.61□□□□□ -1.83
SKA3-207ENST00000536239 KIF18BQ86Y91 864 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 OR14C36Q8NHC7 312 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 CHTF18Q8WVB6 975 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 UBE2Q2Q8WVN8 375 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 HIRIP3Q9BW71 556 aaPredicted RBP3.61□□□□□ -1.83
SKA3-207ENST00000536239 WNT8AQ9H1J5 351 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 CPNE5Q9HCH3 593 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 ZNF804BA4D1E1 1349 aa3.61□□□□□ -1.83
SKA3-207ENST00000536239 TP73O15350 636 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 ADCY6O43306 1168 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 PEX1O43933 1283 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 GAS7O60861 476 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 IGKV2-30P06310 120 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 GCSHP23434 173 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 CANXP27824 592 aaKnown RBP3.6□□□□□ -1.83
SKA3-207ENST00000536239 PTGER1P34995 402 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 PTPN7P35236 360 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 FOLR3P41439 243 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 RAP2BP61225 183 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 HSD11B2P80365 405 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 KLHL22Q53GT1 634 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 KIAA0895LQ68EN5 471 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 NXPE1Q8N323 547 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 LILRB2Q8N423 598 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 REPS2Q8NFH8 660 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 ZNF480Q8WV37 535 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 MKL1Q969V6 931 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 FCRL4Q96PJ5 515 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 ANO3Q9BYT9 981 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 PPP2R3BQ9Y5P8 575 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 AATKQ6ZMQ8 1374 aa3.6□□□□□ -1.83
SKA3-207ENST00000536239 MANFP55145 182 aaKnown RBP3.59□□□□□ -1.83
SKA3-207ENST00000536239 PHC1P78364 1004 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 EXOSC10Q01780 885 aaKnown RBP3.59□□□□□ -1.83
SKA3-207ENST00000536239 DSG1Q02413 1049 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 EIF2B5Q13144 721 aaKnown RBP3.59□□□□□ -1.83
SKA3-207ENST00000536239 MTX3Q5HYI7 312 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 RRP12Q5JTH9 1297 aaKnown RBP3.59□□□□□ -1.83
SKA3-207ENST00000536239 FOXR2Q6PJQ5 311 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 ZNF572Q7Z3I7 529 aaPredicted RBP3.59□□□□□ -1.83
SKA3-207ENST00000536239 DRC7Q8IY82 874 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 COLGALT2Q8IYK4 626 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 ZNF610Q8N9Z0 462 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 TANGO6Q9C0B7 1094 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 PRDM12Q9H4Q4 367 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 THG1LQ9NWX6 298 aaKnown RBP3.59□□□□□ -1.83
SKA3-207ENST00000536239 FLRT1Q9NZU1 646 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 MTO1Q9Y2Z2 717 aaKnown RBP3.59□□□□□ -1.83
SKA3-207ENST00000536239 CDY2AQ9Y6F7 541 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 AOX1Q06278 1338 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 RPTORQ8N122 1335 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 ATRNL1Q5VV63 1379 aa3.59□□□□□ -1.83
SKA3-207ENST00000536239 CCDC151A5D8V7 595 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 ZNF891A8MT65 544 aaPredicted RBP3.58□□□□□ -1.84
SKA3-207ENST00000536239 ORC4O43929 436 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 PHF2O75151 1096 aa3.58□□□□□ -1.84
SKA3-207ENST00000536239 ERN1O75460 977 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms