RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 DGAT1O75907 488 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 GH1P01241 217 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 ZNF157P51786 506 aaPredicted RBP19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 SNAPC2Q13487 334 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 TGS1Q96RS0 853 aaKnown RBP19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 NOP53Q9NZM5 478 aaKnown RBP19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 ZFATQ9P243 1243 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 ARHGAP10A1A4S6 786 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 KIF28PB7ZC32 967 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 C19orf81C9J6K1 198 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 IER5Q5VY09 327 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 MAP3K4Q9Y6R4 1608 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 AP3B1O00203 1094 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 PDXKO00764 312 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 C18orf8Q96DM3 657 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 ZFYVE28Q9HCC9 887 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 C3orf70A6NLC5 250 aaPredicted RBP19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 RTN2O75298 545 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 GFAPP14136 432 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 SLC1A1P43005 524 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 PDXDC1Q6P996 788 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 RPAINQ86UA6 219 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 SCFD1Q8WVM8 642 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 PNPLA7Q6ZV29 1317 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 UPP2O95045 317 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 SERPIND1P05546 499 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 PPP2R2AP63151 447 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 ATP2C1P98194 919 aaPredicted RBP19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 TMEM132DQ14C87 1099 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 C12orf60Q5U649 245 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 LPAR1Q92633 364 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 FOPNLQ96NB1 174 aa19.17■□□□□ 0.66
SFSWAP-203ENST00000535236 HMBSP08397 361 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 MTHFD1LQ6UB35 978 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 TMEM143Q96AN5 459 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 SRPK1Q96SB4 655 aaKnown RBP19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 YIPF2Q9BWQ6 316 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 HSPBP1Q9NZL4 362 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 RGL1Q9NZL6 768 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 SPDYE5A6NIY4 337 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 PSMD3O43242 534 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 SCP2P22307 547 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 BAATQ14032 418 aaPredicted RBP19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 KRT72Q14CN4 511 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 SPDYE7PQ495Y7 208 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 SLC16A3O15427 465 aaKnown RBP19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 KCNN4O15554 427 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 HMOX2P30519 316 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 NCAPHQ15003 741 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 OSBPL5Q9H0X9 879 aaPredicted RBP19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 DOLKQ9UPQ8 538 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 AXIN2Q9Y2T1 843 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 AKT1P31749 480 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 STRIP1Q5VSL9 837 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 FBXO38Q6PIJ6 1188 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 GSPT2Q8IYD1 628 aaKnown RBP19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 HACL1Q9UJ83 578 aa19.16■□□□□ 0.66
SFSWAP-203ENST00000535236 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 TTC26A0AVF1 554 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 VGLL3A8MV65 326 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 GGCXP38435 758 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 SESN2P58004 480 aaPredicted RBP19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 KRT17Q04695 432 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 TBC1D16Q8TBP0 767 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 MED15Q96RN5 788 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 TAF1DQ9H5J8 278 aaPredicted RBP19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 MAD2L2Q9UI95 211 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 KIF1BO60333 1816 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 NPHP3-ACAD11A0A0J9YXS1 232 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 PRRG1O14668 218 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 KCNQ2O43526 872 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 TLR2O60603 784 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 PDIA5Q14554 519 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 ADCK2Q7Z695 626 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 ATPAF2Q8N5M1 289 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 SEPT1Q8WYJ6 367 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 EHD2Q9NZN4 543 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 SAMD9LQ8IVG5 1584 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 DHX34Q14147 1143 aaKnown RBP19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 LRRC8EQ6NSJ5 796 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 ZNF280CQ8ND82 737 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 SELENONQ9NZV5 590 aa19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 PNMA6AP0CW24 399 aaPredicted RBP19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 PDAP1Q13442 181 aaKnown RBP19.15■□□□□ 0.66
SFSWAP-203ENST00000535236 ESYT3A0FGR9 886 aa19.14■□□□□ 0.66
SFSWAP-203ENST00000535236 BLVRAP53004 296 aa19.14■□□□□ 0.66
SFSWAP-203ENST00000535236 HIF1AQ16665 826 aa19.14■□□□□ 0.66
SFSWAP-203ENST00000535236 ABHD8Q96I13 439 aa19.14■□□□□ 0.66
SFSWAP-203ENST00000535236 A0A0G2JLW4 131 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 RGS7P49802 495 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 AGR3Q8TD06 166 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 FAM161BQ96MY7 647 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 SEPT5Q99719 369 aaPredicted RBP19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 CYP4F11Q9HBI6 524 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 WDR35Q9P2L0 1181 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 CHUKO15111 745 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 AP2B1P63010 937 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 SGMS1Q86VZ5 419 aa19.14■□□□□ 0.65
SFSWAP-203ENST00000535236 RCOR2Q8IZ40 523 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms