RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 NPTX2P47972 431 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 ZNF445P59923 1031 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 FAM193AP78312 1265 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 RAD51AP2Q09MP3 1159 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 USP41Q3LFD5 358 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 GLRA4Q5JXX5 417 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 KIAA0319Q5VV43 1072 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 ELMSAN1Q6PJG2 1045 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 C1orf186Q6ZWK4 172 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 APBB1IPQ7Z5R6 666 aaPredicted RBP9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 GPR149Q86SP6 731 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 DAW1Q8N136 415 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 RIN2Q8WYP3 895 aaPredicted RBP9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 MFSD14AQ96MC6 490 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 PNMA5Q96PV4 448 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 RXFP1Q9HBX9 757 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 TNFSF13BQ9Y275 285 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 TECTAO75443 2155 aa9.38□□□□□ -0.91
SFSWAP-202ENST00000535202 MTCL1Q9Y4B5 1905 aaKnown RBP9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 VPS37CA5D8V6 355 aaPredicted RBP9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 SLC16A4O15374 487 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 PLA2G4BP0C869 781 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 SPATA31D3P0C874 917 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 HARSP12081 509 aaKnown RBP9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 RPL17P18621 184 aaKnown RBP9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 GUCY2CP25092 1073 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 OSTNP61366 133 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 SIGLEC14Q08ET2 396 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 MAPK7Q13164 816 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 ZNF568Q3ZCX4 644 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 HYIQ5T013 277 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 FAM171A1Q5VUB5 890 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 ARL6IP4Q66PJ3 421 aaKnown RBP9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 PRSS55Q6UWB4 352 aaPredicted RBP9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 SPATA31D4Q6ZUB0 917 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 CCDC149Q6ZUS6 474 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 TAS1R3Q7RTX0 852 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 CEP57Q86XR8 500 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 PALB2Q86YC2 1186 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 CEP120Q8N960 986 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 KREMEN2Q8NCW0 462 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 PBXIP1Q96AQ6 731 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 ACO2Q99798 780 aaKnown RBP9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 TIPINQ9BVW5 301 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 TARS2Q9BW92 718 aaKnown RBP9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 MRPL4Q9BYD3 311 aaKnown RBP9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 NT5C3AQ9H0P0 336 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 CDT1Q9H211 546 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 TMEM134Q9H6X4 195 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 CHST7Q9NS84 486 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 ARHGAP28Q9P2N2 729 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 ARIH1Q9Y4X5 557 aaPredicted RBP9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 VWA8A3KMH1 1905 aa9.37□□□□□ -0.91
SFSWAP-202ENST00000535202 CITO14578 2027 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 NPHP3-ACAD11A0A0J9YXS1 232 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 CCDC195A0A1B0GUA6 201 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 GOLGA6L22H0YM25 854 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 RFPL2O75678 378 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 ASGR2P07307 311 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 GRM5P41594 1212 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 YARSP54577 528 aaKnown RBP9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 SLC12A3P55017 1021 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 CACNB1Q02641 598 aaPredicted RBP9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 CREMQ03060 361 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 STRN3Q13033 797 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 MTMR3Q13615 1198 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 NAB2Q15742 525 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 KLHL40Q2TBA0 621 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 TMEM119Q4V9L6 283 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 RTP2Q5QGT7 225 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 C15orf39Q6ZRI6 1047 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 BRAPQ7Z569 592 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 HSCBQ8IWL3 235 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 SUGP1Q8IWZ8 645 aaKnown RBP9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 ZDHHC14Q8IZN3 488 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 SYT2Q8N9I0 419 aaPredicted RBP9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 CMASQ8NFW8 434 aaPredicted RBP9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 MYRIPQ8NFW9 859 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 RASSF8Q8NHQ8 419 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 ACSF2Q96CM8 615 aaPredicted RBP9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 CALML4Q96GE6 196 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 PPP1R10Q96QC0 940 aaKnown RBP9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 TCHPQ9BT92 498 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 TTPALQ9BTX7 342 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 SMOC2Q9H3U7 446 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 C17orf75Q9HAS0 396 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 GOLGA2P5Q9HBQ8 144 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 TMEM51Q9NW97 253 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 FNIP2Q9P278 1114 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 CCDC39Q9UFE4 941 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 LIMD1Q9UGP4 676 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 DPP7Q9UHL4 492 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 SORCS3Q9UPU3 1222 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 ZKSCAN5Q9Y2L8 839 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 MYO10Q9HD67 2058 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 KMT2EQ8IZD2 1858 aa9.36□□□□□ -0.91
SFSWAP-202ENST00000535202 TGM5O43548 720 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 B3GAT3O94766 335 aa9.35□□□□□ -0.91
SFSWAP-202ENST00000535202 BRD1O95696 1058 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms