RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 TOPORSQ9NS56 1045 aaPredicted RBP14.3□□□□□ -0.12
TMEM258-202ENST00000535042 DMAC2Q9NW81 257 aa14.3□□□□□ -0.12
TMEM258-202ENST00000535042 CNTN3Q9P232 1028 aa14.3□□□□□ -0.12
TMEM258-202ENST00000535042 KANSL3Q9P2N6 904 aa14.3□□□□□ -0.12
TMEM258-202ENST00000535042 CACNG4Q9UBN1 327 aa14.3□□□□□ -0.12
TMEM258-202ENST00000535042 TRAF3IP3Q9Y228 551 aa14.3□□□□□ -0.12
TMEM258-202ENST00000535042 FNDC1Q4ZHG4 1894 aaPredicted RBP14.29□□□□□ -0.12
TMEM258-202ENST00000535042 TMEM265A0A087WTH1 108 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 RFXAPO00287 272 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 KIF20AO95235 890 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 KCNE1P15382 129 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 CTNNB1P35222 781 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 SLC11A1P49279 550 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 CYP2J2P51589 502 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 PMS1P54277 932 aaKnown RBP14.29□□□□□ -0.12
TMEM258-202ENST00000535042 BCAR1P56945 870 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 RNASELQ05823 741 aaKnown RBP14.29□□□□□ -0.12
TMEM258-202ENST00000535042 GRIK3Q13003 919 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 GRIN2CQ14957 1233 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 SPOUT1Q5T280 376 aaKnown RBP14.29□□□□□ -0.12
TMEM258-202ENST00000535042 ZNF697Q5TEC3 545 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 RBM43Q6ZSC3 357 aaKnown RBP14.29□□□□□ -0.12
TMEM258-202ENST00000535042 CBWD2Q8IUF1 395 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 COLGALT2Q8IYK4 626 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 GPD1LQ8N335 351 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 TRIML1Q8N9V2 468 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 COLGALT1Q8NBJ5 622 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 NOC3LQ8WTT2 800 aaKnown RBP14.29□□□□□ -0.12
TMEM258-202ENST00000535042 ARNTL2Q8WYA1 636 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 FBXL18Q96ME1 805 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 FAM161BQ96MY7 647 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 PPP1R10Q96QC0 940 aaKnown RBP14.29□□□□□ -0.12
TMEM258-202ENST00000535042 PLEKHA5Q9HAU0 1116 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 TMEM63CQ9P1W3 806 aa14.29□□□□□ -0.12
TMEM258-202ENST00000535042 CGNQ9P2M7 1197 aaKnown RBP14.29□□□□□ -0.12
TMEM258-202ENST00000535042 NT5C1B-RDH14C9J2C7 533 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 KIAA0391O15091 583 aaKnown RBP14.28□□□□□ -0.12
TMEM258-202ENST00000535042 ZC3H11AO75152 810 aaKnown RBP eCLIP14.28□□□□□ -0.12
TMEM258-202ENST00000535042 LDHAP00338 332 aaKnown RBP14.28□□□□□ -0.12
TMEM258-202ENST00000535042 NR3C1P04150 777 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 THP07101 528 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 GALTP07902 379 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 LAG3P18627 525 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 SOX4Q06945 474 aaPredicted RBP14.28□□□□□ -0.12
TMEM258-202ENST00000535042 ZBTB6Q15916 424 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 CENPPQ6IPU0 288 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 GPR153Q6NV75 609 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 KCNT2Q6UVM3 1135 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 TMEM173Q86WV6 379 aaPredicted RBP14.28□□□□□ -0.12
TMEM258-202ENST00000535042 SLC9A9Q8IVB4 645 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 BRSK2Q8IWQ3 736 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 XXYLT1Q8NBI6 393 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 RDH13Q8NBN7 331 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 GOLGA5Q8TBA6 731 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 BCL7CQ8WUZ0 217 aaPredicted RBP14.28□□□□□ -0.12
TMEM258-202ENST00000535042 RABGGTAQ92696 567 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 C18orf25Q96B23 403 aaPredicted RBP14.28□□□□□ -0.12
TMEM258-202ENST00000535042 FAM212AQ96EL1 285 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 PAAF1Q9BRP4 392 aa14.28□□□□□ -0.12
TMEM258-202ENST00000535042 GTPBP4Q9BZE4 634 aaKnown RBP14.28□□□□□ -0.12
TMEM258-202ENST00000535042 TRIM49BA6NDI0 452 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 C5orf67F2Z3F1 127 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 F8W810 466 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 CALUO43852 315 aaPredicted RBP14.27□□□□□ -0.13
TMEM258-202ENST00000535042 NFICP08651 508 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 IGFBP6P24592 240 aaPredicted RBP14.27□□□□□ -0.13
TMEM258-202ENST00000535042 CASP4P49662 377 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 POU5F1Q01860 360 aaKnown RBP14.27□□□□□ -0.13
TMEM258-202ENST00000535042 PPP2R3AQ06190 1150 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 TUSC3Q13454 348 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 CCDC183Q5T5S1 534 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 ANKRD40Q6AI12 368 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 JADE1Q6IE81 842 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 KLHL10Q6JEL2 608 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 SLC39A11Q8N1S5 342 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 KLHL23Q8NBE8 558 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 FBXO22Q8NEZ5 403 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 TMEM174Q8WUU8 243 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 P2RX5Q93086 422 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 DHTKD1Q96HY7 919 aaPredicted RBP14.27□□□□□ -0.13
TMEM258-202ENST00000535042 FAM84AQ96KN4 292 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 ZNF558Q96NG5 402 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 SAMD11Q96NU1 681 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 FAM193BQ96PV7 902 aaPredicted RBP14.27□□□□□ -0.13
TMEM258-202ENST00000535042 TMEM175Q9BSA9 504 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 PRDM12Q9H4Q4 367 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 GOLGA2P5Q9HBQ8 144 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 RBAKQ9NYW8 714 aaPredicted RBP14.27□□□□□ -0.13
TMEM258-202ENST00000535042 RWDD3Q9Y3V2 267 aa14.27□□□□□ -0.13
TMEM258-202ENST00000535042 CASTOR2A6NHX0 329 aa14.26□□□□□ -0.13
TMEM258-202ENST00000535042 ZNF233A6NK53 670 aa14.26□□□□□ -0.13
TMEM258-202ENST00000535042 NRP1O14786 923 aa14.26□□□□□ -0.13
TMEM258-202ENST00000535042 EXOC3O60645 756 aa14.26□□□□□ -0.13
TMEM258-202ENST00000535042 LPXNO60711 386 aa14.26□□□□□ -0.13
TMEM258-202ENST00000535042 ALDH2P05091 517 aa14.26□□□□□ -0.13
TMEM258-202ENST00000535042 ITGB1P05556 798 aa14.26□□□□□ -0.13
TMEM258-202ENST00000535042 RB1P06400 928 aa14.26□□□□□ -0.13
TMEM258-202ENST00000535042 CCNE1P24864 410 aa14.26□□□□□ -0.13
TMEM258-202ENST00000535042 OR1G1P47890 313 aa14.26□□□□□ -0.13
TMEM258-202ENST00000535042 GUCY2FP51841 1108 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms