RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 C4BPAP04003 597 aaKnown RBP21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 PNMA6AP0CW24 399 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ARID5AQ03989 594 aa21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ITGA7Q13683 1181 aa21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ZACNQ401N2 412 aa21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 RAB20Q9NX57 234 aa21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 PTPN22Q9Y2R2 807 aa21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ADGRG1Q9Y653 693 aa21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CXCL8P10145 99 aa21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CRYBB1P53674 252 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ACRBPQ8NEB7 543 aa21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 AIPL1Q9NZN9 384 aa21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 EPN1Q9Y6I3 576 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF1A-205ENST00000534885 NDUFA10O95299 355 aa21.98■■□□□ 1.11
TNFRSF1A-205ENST00000534885 MYCP01106 439 aaPredicted RBP21.98■■□□□ 1.11
TNFRSF1A-205ENST00000534885 STAG3L1P0CL83 205 aa21.98■■□□□ 1.11
TNFRSF1A-205ENST00000534885 MRPS6P82932 125 aaKnown RBP21.98■■□□□ 1.11
TNFRSF1A-205ENST00000534885 PTGISQ16647 500 aa21.98■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CELF4Q9BZC1 486 aaKnown RBP21.98■■□□□ 1.11
TNFRSF1A-205ENST00000534885 MOXD2PA6NHM9 499 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 MEFVO15553 781 aaPredicted RBP21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CABYRO75952 493 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 BIRC3Q13489 604 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 DRAP1Q14919 205 aaPredicted RBP21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ADPGKQ9BRR6 497 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 PI4K2AQ9BTU6 479 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 GPR88Q9GZN0 384 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 UNC93B1Q9H1C4 597 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 RPF1Q9H9Y2 349 aaKnown RBP21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 UBE2TQ9NPD8 197 aaPredicted RBP21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 MYO6Q9UM54 1294 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CDY2AQ9Y6F7 541 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 F8VZ95 297 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 VNN1O95497 513 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CTSHP09668 335 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 C1QTNF8P60827 252 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 PCBP1Q15365 356 aaKnown RBP eCLIP21.97■■□□□ 1.112e-7■■■□□ 16.3
TNFRSF1A-205ENST00000534885 ARHGAP44Q17R89 818 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 TDRD12Q587J7 1177 aaKnown RBP21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 SCARA3Q6AZY7 606 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 WDR49Q8IV35 697 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 REXO1L1PQ8IX06 675 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 C16orf45Q96MC5 204 aaPredicted RBP21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 GLT1D1Q96MS3 346 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 STK33Q9BYT3 514 aa21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 TRMT13Q9NUP7 481 aaKnown RBP21.97■■□□□ 1.11
TNFRSF1A-205ENST00000534885 A0A0U1RQJ8 604 aa21.96■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CLTAP09496 248 aa21.96■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CCDC175P0C221 793 aa21.96■■□□□ 1.11
TNFRSF1A-205ENST00000534885 EIF4A3P38919 411 aaKnown RBP21.96■■□□□ 1.11
TNFRSF1A-205ENST00000534885 NCBP1Q09161 790 aaKnown RBP21.96■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ASIC2Q16515 512 aa21.96■■□□□ 1.11
TNFRSF1A-205ENST00000534885 IRF2BP2Q7Z5L9 587 aa21.96■■□□□ 1.11
TNFRSF1A-205ENST00000534885 EFCAB13Q8IY85 973 aa21.96■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ZNF710Q8N1W2 664 aa21.96■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ATRIPQ8WXE1 791 aa21.96■■□□□ 1.11
TNFRSF1A-205ENST00000534885 KAT5Q92993 513 aa21.96■■□□□ 1.11
TNFRSF1A-205ENST00000534885 MTMR12Q9C0I1 747 aa21.96■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CITO14578 2027 aa21.96■■□□□ 1.11
TNFRSF1A-205ENST00000534885 NPTXRO95502 500 aa21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 HLA-DRAP01903 254 aa21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 SERPING1P05155 500 aa21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 PIK3CAP42336 1068 aa21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 MTFR1Q15390 333 aa21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 SLC9C1Q4G0N8 1177 aa21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 NOTUMQ6P988 496 aa21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 RSPH3Q86UC2 560 aa21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CCDC170Q8IYT3 715 aa21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CCDC42Q96M95 316 aa21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 TSEN34Q9BSV6 310 aaKnown RBP21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 EIF2AQ9BY44 585 aaKnown RBP21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 PIN4Q9Y237 131 aaKnown RBP21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 REXO2Q9Y3B8 237 aaKnown RBP21.95■■□□□ 1.11
TNFRSF1A-205ENST00000534885 A0A1W2PQ45 241 aaPredicted RBP21.95■■□□□ 1.1
TNFRSF1A-205ENST00000534885 A0A1W2PQY0 241 aa21.95■■□□□ 1.1
TNFRSF1A-205ENST00000534885 M0QZ92 97 aa21.95■■□□□ 1.1
TNFRSF1A-205ENST00000534885 ZSCAN12O43309 604 aa21.95■■□□□ 1.1
TNFRSF1A-205ENST00000534885 RFX1P22670 979 aa21.95■■□□□ 1.1
TNFRSF1A-205ENST00000534885 SURF1Q15526 300 aa21.95■■□□□ 1.1
TNFRSF1A-205ENST00000534885 SLC27A1Q6PCB7 646 aa21.95■■□□□ 1.1
TNFRSF1A-205ENST00000534885 FAM228AQ86W67 206 aa21.95■■□□□ 1.1
TNFRSF1A-205ENST00000534885 PPM1KQ8N3J5 372 aa21.95■■□□□ 1.1
TNFRSF1A-205ENST00000534885 NOC2LQ9Y3T9 749 aaKnown RBP21.95■■□□□ 1.1
TNFRSF1A-205ENST00000534885 TRPV2Q9Y5S1 764 aa21.95■■□□□ 1.1
TNFRSF1A-205ENST00000534885 B4GALT4O60513 344 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 GFPT2O94808 682 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 CHRNA1P02708 482 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 CYLC1P35663 651 aaPredicted RBP21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 KLHL30Q0D2K2 578 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 HELQQ8TDG4 1101 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 TATDN2Q93075 761 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 KREMEN1Q96MU8 473 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 NT5C1BQ96P26 610 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 DAAM1Q9Y4D1 1078 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 LACTBL1A8MY62 500 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 SOX5P35711 763 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 STAT1P42224 750 aa21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 TFAMQ00059 246 aaKnown RBP21.94■■□□□ 1.1
TNFRSF1A-205ENST00000534885 TRIP11Q15643 1979 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms