RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 BTNL9Q6UXG8 535 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 TAOK1Q7L7X3 1001 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 FRMD5Q7Z6J6 570 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 NLGN1Q8N2Q7 840 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 RBM46Q8TBY0 533 aaKnown RBP20.47■□□□□ 0.87
SMPD1-210ENST00000534405 RNF25Q96BH1 459 aaPredicted RBP20.47■□□□□ 0.87
SMPD1-210ENST00000534405 GMCL1Q96IK5 515 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 KLHL14Q9P2G3 628 aa20.47■□□□□ 0.87
SMPD1-210ENST00000534405 CNOT7Q9UIV1 285 aaKnown RBP20.47■□□□□ 0.87
SMPD1-210ENST00000534405 KRIT1O00522 736 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 GH2P01242 217 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 MMP10P09238 476 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 PON1P27169 355 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 SH2D4BQ5SQS7 431 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 RASIP1Q5U651 963 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 STRIP1Q5VSL9 837 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 SMC1BQ8NDV3 1235 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 MRIQ9BWK5 157 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 H0Y3Z8 333 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 PFDN1O60925 122 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 CIITAP33076 1130 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 CEP128Q6ZU80 1094 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 TTC8Q8TAM2 541 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 PPP1R14BQ96C90 147 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 FAM20AQ96MK3 541 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 WDR37Q9Y2I8 494 aa20.46■□□□□ 0.87
SMPD1-210ENST00000534405 SFI1A8K8P3 1242 aa20.45■□□□□ 0.86
SMPD1-210ENST00000534405 BTNL10A8MVZ5 291 aa20.45■□□□□ 0.86
SMPD1-210ENST00000534405 KPNB1Q14974 876 aaKnown RBP20.45■□□□□ 0.86
SMPD1-210ENST00000534405 GSTA3Q16772 222 aa20.45■□□□□ 0.86
SMPD1-210ENST00000534405 DCAF17Q5H9S7 520 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-210ENST00000534405 EIF2AK1Q9BQI3 630 aaKnown RBP20.45■□□□□ 0.86
SMPD1-210ENST00000534405 GOLPH3Q9H4A6 298 aa20.45■□□□□ 0.86
SMPD1-210ENST00000534405 TDRD3Q9H7E2 651 aaKnown RBP20.45■□□□□ 0.86
SMPD1-210ENST00000534405 ZNF219Q9P2Y4 722 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-210ENST00000534405 ZNF646O15015 1829 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-210ENST00000534405 PDXKO00764 312 aa20.45■□□□□ 0.86
SMPD1-210ENST00000534405 CLIC2O15247 247 aa20.45■□□□□ 0.86
SMPD1-210ENST00000534405 CYP1A1P04798 512 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-210ENST00000534405 BMP3P12645 472 aa20.45■□□□□ 0.86
SMPD1-210ENST00000534405 POU5F1Q01860 360 aaKnown RBP20.45■□□□□ 0.86
SMPD1-210ENST00000534405 MKRN3Q13064 507 aaKnown RBP20.45■□□□□ 0.86
SMPD1-210ENST00000534405 EXOC3L4Q17RC7 722 aa20.45■□□□□ 0.86
SMPD1-210ENST00000534405 ECHDC2Q86YB7 292 aa20.45■□□□□ 0.86
SMPD1-210ENST00000534405 RNF168Q8IYW5 571 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-210ENST00000534405 RASGEF1CQ8N431 466 aa20.45■□□□□ 0.86
SMPD1-210ENST00000534405 LRRC8CQ8TDW0 803 aa20.45■□□□□ 0.86
SMPD1-210ENST00000534405 SLC35B4Q969S0 331 aa20.45■□□□□ 0.86
SMPD1-210ENST00000534405 ZDHHC18Q9NUE0 388 aa20.45■□□□□ 0.86
SMPD1-210ENST00000534405 FOSP01100 380 aaPredicted RBP20.44■□□□□ 0.86
SMPD1-210ENST00000534405 NR3C1P04150 777 aa20.44■□□□□ 0.86
SMPD1-210ENST00000534405 EPHA7Q15375 998 aa20.44■□□□□ 0.86
SMPD1-210ENST00000534405 NAP1L3Q99457 506 aaPredicted RBP20.44■□□□□ 0.86
SMPD1-210ENST00000534405 SIX2Q9NPC8 291 aa20.44■□□□□ 0.86
SMPD1-210ENST00000534405 IGLV3-22A0A075B6J6 115 aa20.44■□□□□ 0.86
SMPD1-210ENST00000534405 GCNT3O95395 438 aa20.44■□□□□ 0.86
SMPD1-210ENST00000534405 EYA4O95677 639 aa20.44■□□□□ 0.86
SMPD1-210ENST00000534405 XRCC5P13010 732 aaKnown RBP20.44■□□□□ 0.86
SMPD1-210ENST00000534405 ITGA4P13612 1032 aa20.44■□□□□ 0.86
SMPD1-210ENST00000534405 BMT2Q1RMZ1 405 aa20.44■□□□□ 0.86
SMPD1-210ENST00000534405 GJB7Q6PEY0 223 aa20.44■□□□□ 0.86
SMPD1-210ENST00000534405 EXOC3L1Q86VI1 746 aa20.44■□□□□ 0.86
SMPD1-210ENST00000534405 SLC35C1Q96A29 364 aa20.44■□□□□ 0.86
SMPD1-210ENST00000534405 MIS12Q9H081 205 aa20.44■□□□□ 0.86
SMPD1-210ENST00000534405 DENND2DQ9H6A0 471 aaPredicted RBP20.44■□□□□ 0.86
SMPD1-210ENST00000534405 QTRT2Q9H974 415 aaKnown RBP20.44■□□□□ 0.86
SMPD1-210ENST00000534405 TYW1Q9NV66 732 aaKnown RBP20.44■□□□□ 0.86
SMPD1-210ENST00000534405 RHBDL2Q9NX52 303 aa20.44■□□□□ 0.86
SMPD1-210ENST00000534405 LARSQ9P2J5 1176 aaKnown RBP20.44■□□□□ 0.86
SMPD1-210ENST00000534405 ZBTB39O15060 712 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 CALUO43852 315 aaPredicted RBP20.43■□□□□ 0.86
SMPD1-210ENST00000534405 CTTNQ14247 550 aaKnown RBP20.43■□□□□ 0.86
SMPD1-210ENST00000534405 KIAA1755Q5JYT7 1200 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 TCERG1LQ5VWI1 586 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 CGB2Q6NT52 195 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 KRT27Q7Z3Y8 459 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 ZC3H18Q86VM9 953 aaKnown RBP20.43■□□□□ 0.86
SMPD1-210ENST00000534405 CKAP2Q8WWK9 683 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 SCG3Q8WXD2 468 aaKnown RBP20.43■□□□□ 0.86
SMPD1-210ENST00000534405 NR1H4Q96RI1 486 aaPredicted RBP20.43■□□□□ 0.86
SMPD1-210ENST00000534405 WDR18Q9BV38 432 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 CELF4Q9BZC1 486 aaKnown RBP20.43■□□□□ 0.86
SMPD1-210ENST00000534405 PRR12Q9ULL5 1215 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 RABGAP1Q9Y3P9 1069 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 BRWD3Q6RI45 1802 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 SMIM23A6NLE4 172 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 TGFB1I1O43294 461 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 ZNF189O75820 626 aaPredicted RBP20.43■□□□□ 0.86
SMPD1-210ENST00000534405 ZNF24P17028 368 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 ZRSR2Q15696 482 aaKnown RBP20.43■□□□□ 0.86
SMPD1-210ENST00000534405 ZC2HC1CQ53FD0 456 aaPredicted RBP20.43■□□□□ 0.86
SMPD1-210ENST00000534405 SNX30Q5VWJ9 437 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 SMYD1Q8NB12 490 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 HIC2Q96JB3 615 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 POLR3CQ9BUI4 534 aaPredicted RBP20.43■□□□□ 0.86
SMPD1-210ENST00000534405 TBC1D10AQ9BXI6 508 aa20.43■□□□□ 0.86
SMPD1-210ENST00000534405 ENTPD5O75356 428 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 ECE1P42892 770 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 SLC29A2Q14542 456 aa20.42■□□□□ 0.86
SMPD1-210ENST00000534405 LRRC14Q15048 493 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms