RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 CXCL9Q07325 125 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 FAM102AQ5T9C2 384 aaPredicted RBP18.26■□□□□ 0.51
PHRF1-206ENST00000534320 ACAP3Q96P50 834 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 MRPL46Q9H2W6 279 aaKnown RBP18.26■□□□□ 0.51
PHRF1-206ENST00000534320 IQANK1A0A1B0GTG1 560 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 TMEM253P0C7T8 217 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 SNAPC2Q13487 334 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 NBPF9Q3BBW0 867 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 GJB7Q6PEY0 223 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 IDI2Q9BXS1 227 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 PFDN6O15212 129 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 MAGOHP61326 146 aaKnown RBP18.26■□□□□ 0.51
PHRF1-206ENST00000534320 CPA5Q8WXQ8 436 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 TUBB6Q9BUF5 446 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 TXLNGQ9NUQ3 528 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 FBXL5Q9UKA1 691 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 GRIK5Q16478 980 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 DACT2Q5SW24 774 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 TBX20Q9UMR3 447 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 SPDL1Q96EA4 605 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 C17orf75Q9HAS0 396 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 AFG3L2Q9Y4W6 797 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 GAKO14976 1311 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 KRT14P02533 472 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 MMEP08473 750 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 BACE1P56817 501 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 ACTR2P61160 394 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 OR6J1Q8NGC5 347 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 SNF8Q96H20 258 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 L2HGDHQ9H9P8 463 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 RBM12Q9NTZ6 932 aaKnown RBP18.25■□□□□ 0.51
PHRF1-206ENST00000534320 HLA-DRAP01903 254 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 RBBP8NLQ8NC74 664 aaPredicted RBP18.25■□□□□ 0.51
PHRF1-206ENST00000534320 TTC25Q96NG3 672 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 SMYD2Q9NRG4 433 aa18.25■□□□□ 0.51
PHRF1-206ENST00000534320 A8MXQ7 604 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 EXTL3O43909 919 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 SGSM1Q2NKQ1 1148 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 FAM83AQ86UY5 434 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 SCFD1Q8WVM8 642 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 KIFC3Q9BVG8 833 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 SMARCAL1Q9NZC9 954 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 KRT3P12035 628 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 PCYT1AP49585 367 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 INPP5FQ9Y2H2 1132 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 ATRNO75882 1429 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 PON1P27169 355 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 PMS1P54277 932 aaKnown RBP18.24■□□□□ 0.51
PHRF1-206ENST00000534320 RHBDL3P58872 404 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 RPS6KA2Q15349 733 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 CCNI2Q6ZMN8 369 aaPredicted RBP18.24■□□□□ 0.51
PHRF1-206ENST00000534320 DEPDC1BQ8WUY9 529 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 GOLGA8MH3BSY2 632 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 GPS1Q13098 491 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 SPDYE2Q495Y8 402 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 KIAA1841Q6NSI8 718 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 ATP6V1G3Q96LB4 118 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 CYP26B1Q9NR63 512 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 ANGPTL2Q9UKU9 493 aa18.24■□□□□ 0.51
PHRF1-206ENST00000534320 GH1P01241 217 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 NUGGCQ68CJ6 796 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 TRIM65Q6PJ69 517 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 PTF1AQ7RTS3 328 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 SAMD3Q8N6K7 520 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 NOA1Q8NC60 698 aaKnown RBP18.23■□□□□ 0.51
PHRF1-206ENST00000534320 PCDHB2Q9Y5E7 798 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 MMP14P50281 582 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 TGFB2P61812 414 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 THEM5Q8N1Q8 247 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 KIAA0895Q8NCT3 520 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.23■□□□□ 0.513e-9■■■■■ 80.2
PHRF1-206ENST00000534320 USP6NLQ92738 828 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 WDR91A4D1P6 747 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 RASA4BC9J798 803 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 RASA4O43374 803 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 ADORA2BP29275 332 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 RANBP1P43487 201 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 KRT17Q04695 432 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 ANKRD13AQ8IZ07 590 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 PNMA5Q96PV4 448 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 KCNQ5Q9NR82 932 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 IRAK4Q9NWZ3 460 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 AGAP1Q9UPQ3 857 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 NFIBO00712 420 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 MAGEB2O15479 319 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 TTI1O43156 1089 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 CASP4P49662 377 aa18.23■□□□□ 0.51
PHRF1-206ENST00000534320 CPSF3Q9UKF6 684 aaKnown RBP18.23■□□□□ 0.51
PHRF1-206ENST00000534320 GSTA1P08263 222 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 GSTA2P09210 222 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 VCAM1P19320 739 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 FKBP1AP62942 108 aaKnown RBP18.22■□□□□ 0.51
PHRF1-206ENST00000534320 CDK17Q00537 523 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 IER5Q5VY09 327 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 VIPAS39Q9H9C1 493 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 GPRC5CQ9NQ84 441 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 ASAP2O43150 1006 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 KRT37O76014 449 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 PPP2R2AP63151 447 aa18.22■□□□□ 0.51
PHRF1-206ENST00000534320 KIAA1755Q5JYT7 1200 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms