RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 RABGGTAQ92696 567 aa14.61□□□□□ -0.07
CAPN1-227ENST00000533909 KCNN1Q92952 543 aa14.61□□□□□ -0.07
CAPN1-227ENST00000533909 SNX27Q96L92 541 aa14.61□□□□□ -0.07
CAPN1-227ENST00000533909 EMILIN2Q9BXX0 1053 aa14.61□□□□□ -0.07
CAPN1-227ENST00000533909 TRIM9Q9C026 710 aa14.61□□□□□ -0.07
CAPN1-227ENST00000533909 OLFML3Q9NRN5 406 aa14.61□□□□□ -0.07
CAPN1-227ENST00000533909 MRPL17Q9NRX2 175 aaKnown RBP14.61□□□□□ -0.07
CAPN1-227ENST00000533909 SSX2IPQ9Y2D8 614 aa14.61□□□□□ -0.07
CAPN1-227ENST00000533909 UNC80Q8N2C7 3258 aa14.61□□□□□ -0.07
CAPN1-227ENST00000533909 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-227ENST00000533909 SMIM28A0A1B0GU29 152 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 A0A1B0GVL5 298 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 C2orf71A6NGG8 1288 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 SPDYE4A6NLX3 237 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 C2CD2LO14523 706 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 PIGRP01833 764 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 CTSAP10619 480 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 PFKFB1P16118 471 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 KCNQ1P51787 676 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 PPP2R3AQ06190 1150 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 CLUL1Q15846 466 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 PUS10Q3MIT2 529 aaKnown RBP14.6□□□□□ -0.07
CAPN1-227ENST00000533909 SEZ6Q53EL9 994 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 LLGL2Q6P1M3 1020 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 FSIP1Q8NA03 581 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 AUTS2Q8WXX7 1259 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 CCDC34Q96HJ3 373 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 UROC1Q96N76 676 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 ZBP1Q9H171 429 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 MARCH5Q9NX47 278 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 USP25Q9UHP3 1055 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 ADAM28Q9UKQ2 775 aa14.6□□□□□ -0.07
CAPN1-227ENST00000533909 SF3B1O75533 1304 aaKnown RBP eCLIP14.6□□□□□ -0.07
CAPN1-227ENST00000533909 FRMD3A2A2Y4 597 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 ABLIM1O14639 778 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 OGTO15294 1046 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 LINC01565O15544 149 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 SOD2P04179 222 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 SLFN14P0C7P3 912 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 SYKP43405 635 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 GLUD2P49448 558 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 COASYQ13057 564 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 ADAM15Q13444 863 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 POSTNQ15063 836 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 DUSP6Q16828 381 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 USP41Q3LFD5 358 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 LEXMQ3ZCV2 418 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 L1TD1Q5T7N2 865 aaKnown RBP14.59□□□□□ -0.07
CAPN1-227ENST00000533909 PTCRAQ6ISU1 281 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-227ENST00000533909 FUT10Q6P4F1 479 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 HASPINQ8TF76 798 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 POMGNT1Q8WZA1 660 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 FAM212AQ96EL1 285 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 PPP1R10Q96QC0 940 aaKnown RBP14.59□□□□□ -0.07
CAPN1-227ENST00000533909 FIZ1Q96SL8 496 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 C7orf25Q9BPX7 421 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 HERC2P3Q9BVR0 1158 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 BLZF1Q9H2G9 400 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 TMEM206Q9H813 350 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 RPF1Q9H9Y2 349 aaKnown RBP14.59□□□□□ -0.07
CAPN1-227ENST00000533909 GDPD2Q9HCC8 539 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 SERTAD1Q9UHV2 236 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 BDP1A6H8Y1 2624 aa14.59□□□□□ -0.07
CAPN1-227ENST00000533909 A0A0B4J269 797 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 A0A1W2PQ27 194 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 A0A1W2PQ64 194 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 A0A1W2PQD8 194 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 XPOTO43592 962 aaKnown RBP14.58□□□□□ -0.08
CAPN1-227ENST00000533909 TRAPPC3O43617 180 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 B3GAT3O94766 335 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 CXCL8P10145 99 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 MYBP10242 640 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 KLRC2P26717 231 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 ELAVL2Q12926 359 aaKnown RBP14.58□□□□□ -0.08
CAPN1-227ENST00000533909 COL19A1Q14993 1142 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 PTPN14Q15678 1187 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 CTC1Q2NKJ3 1217 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 FAM26FQ5R3K3 315 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 DCLRE1AQ6PJP8 1040 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 UNC13DQ70J99 1090 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 ADAMTS19Q8TE59 1207 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 NOC3LQ8WTT2 800 aaKnown RBP14.58□□□□□ -0.08
CAPN1-227ENST00000533909 CCDC47Q96A33 483 aaKnown RBP14.58□□□□□ -0.08
CAPN1-227ENST00000533909 DDX27Q96GQ7 796 aaKnown RBP14.58□□□□□ -0.08
CAPN1-227ENST00000533909 VN1R3Q9BXE9 311 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 CXCL16Q9H2A7 254 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 PLEKHA5Q9HAU0 1116 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 CNTN3Q9P232 1028 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 CACNG4Q9UBN1 327 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 CD207Q9UJ71 328 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 AGO2Q9UKV8 859 aaKnown RBP14.58□□□□□ -0.08
CAPN1-227ENST00000533909 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.58□□□□□ -0.08
CAPN1-227ENST00000533909 NCOR1O75376 2440 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 REV3LO60673 3130 aa14.58□□□□□ -0.08
CAPN1-227ENST00000533909 ANKRD63C9JTQ0 380 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 F8W810 466 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 PRPF6O94906 941 aaKnown RBP14.57□□□□□ -0.08
CAPN1-227ENST00000533909 KIF4AO95239 1232 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 KCNE1P15382 129 aa14.57□□□□□ -0.08
CAPN1-227ENST00000533909 CREMQ03060 361 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms