RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 ITGA4P13612 1032 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 SCNN1GP51170 649 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 DRP2Q13474 957 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 YAF2Q8IY57 180 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 TMEFF1Q8IYR6 380 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 TTC8Q8TAM2 541 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 ZSWIM3Q96MP5 696 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 NRBP2Q9NSY0 501 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 GABBR1Q9UBS5 961 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 SEC63Q9UGP8 760 aaKnown RBP11.87□□□□□ -0.51
CSDE1-215ENST00000533818 NOTCH4Q99466 2003 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 SF3B1O75533 1304 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■■■■■ 28.6
CSDE1-215ENST00000533818 COL4A2P08572 1712 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 CAPN8A6NHC0 703 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 DHX15O43143 795 aaKnown RBP11.86□□□□□ -0.51
CSDE1-215ENST00000533818 PSAPP07602 524 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 OR1D2P34982 312 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 MLH1P40692 756 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 ABCG1P45844 678 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 RAB33AQ14088 237 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 PRSS36Q5K4E3 855 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 UBXN11Q5T124 520 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 FAM171A1Q5VUB5 890 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 PDXDC1Q6P996 788 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 ZNF410Q86VK4 478 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 SCUBE3Q8IX30 993 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 HDDC3Q8N4P3 179 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 OTUD7AQ8TE49 926 aaPredicted RBP11.86□□□□□ -0.51
CSDE1-215ENST00000533818 ADAMTS14Q8WXS8 1223 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 PIGKQ92643 395 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 EVI5LQ96CN4 794 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 ZFP42Q96MM3 310 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 HHIPQ96QV1 700 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 CORO1BQ9BR76 489 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 NUSAP1Q9BXS6 441 aaKnown RBP11.86□□□□□ -0.51
CSDE1-215ENST00000533818 AGPAT5Q9NUQ2 364 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 MIOSQ9NXC5 875 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 DKK4Q9UBT3 224 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 EVLQ9UI08 416 aaPredicted RBP11.86□□□□□ -0.51
CSDE1-215ENST00000533818 INVSQ9Y283 1065 aa11.86□□□□□ -0.51
CSDE1-215ENST00000533818 TEP1Q99973 2627 aaKnown RBP11.86□□□□□ -0.51
CSDE1-215ENST00000533818 SHROOM3Q8TF72 1996 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 HEPACAM2A8MVW5 462 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 CHADO15335 359 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 MICAL2O94851 1124 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 DNM2P50570 870 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 CFHR1Q03591 330 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 TRIM61Q5EBN2 209 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 PMS2CLQ68D20 193 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 PLEKHM2Q8IWE5 1019 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 PNPLA1Q8N8W4 532 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 CNNM3Q8NE01 707 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 PIP4K2CQ8TBX8 421 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 RNF39Q9H2S5 420 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 CNNM2Q9H8M5 875 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 TRPV4Q9HBA0 871 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 POLR3BQ9NW08 1133 aaPredicted RBP11.85□□□□□ -0.51
CSDE1-215ENST00000533818 TCEAL9Q9UHQ7 104 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 PCDHA10Q9Y5I2 948 aa11.85□□□□□ -0.51
CSDE1-215ENST00000533818 WDR81Q562E7 1941 aa11.84□□□□□ -0.51
CSDE1-215ENST00000533818 PYCARD-AS1I3L0S3 204 aa11.84□□□□□ -0.51
CSDE1-215ENST00000533818 IPO5O00410 1097 aaKnown RBP11.84□□□□□ -0.51
CSDE1-215ENST00000533818 LRG1P02750 347 aa11.84□□□□□ -0.51
CSDE1-215ENST00000533818 OATP04181 439 aa11.84□□□□□ -0.51
CSDE1-215ENST00000533818 MS4A1P11836 297 aa11.84□□□□□ -0.51
CSDE1-215ENST00000533818 ENGP17813 658 aa11.84□□□□□ -0.51
CSDE1-215ENST00000533818 ZNF76P36508 570 aa11.84□□□□□ -0.51
CSDE1-215ENST00000533818 CCR2P41597 374 aa11.84□□□□□ -0.51
CSDE1-215ENST00000533818 DHPSP49366 369 aaPredicted RBP11.84□□□□□ -0.51
CSDE1-215ENST00000533818 NMIQ13287 307 aaPredicted RBP11.84□□□□□ -0.51
CSDE1-215ENST00000533818 HNRNPDQ14103 355 aaKnown RBP11.84□□□□□ -0.51
CSDE1-215ENST00000533818 CYP4A22Q5TCH4 519 aa11.84□□□□□ -0.51
CSDE1-215ENST00000533818 ZNF746Q6NUN9 644 aaPredicted RBP11.84□□□□□ -0.51
CSDE1-215ENST00000533818 PDZD4Q76G19 769 aaPredicted RBP11.84□□□□□ -0.51
CSDE1-215ENST00000533818 RHPN2Q8IUC4 686 aa11.84□□□□□ -0.51
CSDE1-215ENST00000533818 SMG8Q8ND04 991 aaKnown RBP11.84□□□□□ -0.51
CSDE1-215ENST00000533818 ZSCAN18Q8TBC5 510 aaPredicted RBP11.84□□□□□ -0.51
CSDE1-215ENST00000533818 E2F7Q96AV8 911 aa11.84□□□□□ -0.51
CSDE1-215ENST00000533818 NLRP4Q96MN2 994 aa11.84□□□□□ -0.51
CSDE1-215ENST00000533818 NCANO14594 1321 aa11.84□□□□□ -0.51
CSDE1-215ENST00000533818 HOXA11P31270 313 aaPredicted RBP11.83□□□□□ -0.52
CSDE1-215ENST00000533818 ATXN3P54252 364 aaPredicted RBP11.83□□□□□ -0.52
CSDE1-215ENST00000533818 MFAP1P55081 439 aaKnown RBP11.83□□□□□ -0.52
CSDE1-215ENST00000533818 CYP4F3Q08477 520 aa11.83□□□□□ -0.52
CSDE1-215ENST00000533818 SPIRE1Q08AE8 756 aa11.83□□□□□ -0.52
CSDE1-215ENST00000533818 TRIP6Q15654 476 aaKnown RBP11.83□□□□□ -0.52
CSDE1-215ENST00000533818 CYB5R4Q7L1T6 521 aa11.83□□□□□ -0.52
CSDE1-215ENST00000533818 C11orf74Q86VG3 221 aa11.83□□□□□ -0.52
CSDE1-215ENST00000533818 KSR1Q8IVT5 923 aa11.83□□□□□ -0.52
CSDE1-215ENST00000533818 SMAP1Q8IYB5 467 aaPredicted RBP11.83□□□□□ -0.52
CSDE1-215ENST00000533818 HASPINQ8TF76 798 aa11.83□□□□□ -0.52
CSDE1-215ENST00000533818 DCBLD2Q96PD2 775 aa11.83□□□□□ -0.52
CSDE1-215ENST00000533818 TMEM209Q96SK2 561 aa11.83□□□□□ -0.52
CSDE1-215ENST00000533818 SPZ1Q9BXG8 430 aa11.83□□□□□ -0.52
CSDE1-215ENST00000533818 CHMP4BQ9H444 224 aaKnown RBP11.83□□□□□ -0.52
CSDE1-215ENST00000533818 DCTPP1Q9H773 170 aa11.83□□□□□ -0.52
CSDE1-215ENST00000533818 GTSE1Q9NYZ3 720 aa11.83□□□□□ -0.52
CSDE1-215ENST00000533818 SUCLA2Q9P2R7 463 aaPredicted RBP11.83□□□□□ -0.52
CSDE1-215ENST00000533818 MBD1Q9UIS9 605 aaPredicted RBP11.83□□□□□ -0.52
CSDE1-215ENST00000533818 SAMM50Q9Y512 469 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms