RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 IMPG1Q17R60 797 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 TKFCQ3LXA3 575 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 FAM102AQ5T9C2 384 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-236ENST00000533667 SWSAP1Q6NVH7 229 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 TRAPPC11Q7Z392 1133 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 IGDCC4Q8TDY8 1250 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 CELF1Q92879 486 aaKnown RBP7.4□□□□□ -1.22
CTNND1-236ENST00000533667 TRABDQ9H4I3 376 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 SMYD3Q9H7B4 428 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 AMACRQ9UHK6 382 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 DCTN4Q9UJW0 460 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 PP2D1A8MPX8 630 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 KRT16P08779 473 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 IL10P22301 178 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 HIC1Q14526 733 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 SLC44A4Q53GD3 710 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 CCNYL1Q8N7R7 359 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 SLC44A5Q8NCS7 719 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 HIPK4Q8NE63 616 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 HNRNPLLQ8WVV9 542 aaKnown RBP7.4□□□□□ -1.23
CTNND1-236ENST00000533667 ANKRD7Q92527 254 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 EXT2Q93063 718 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 PCSK1NQ9UHG2 260 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 FOXN1O15353 648 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 SERPINI2O75830 405 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 ANP32DO95626 131 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 RAD23BP54727 409 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 CDH6P55285 790 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 PIGHQ14442 188 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-236ENST00000533667 ZNF677Q86XU0 584 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 MMGT1Q8N4V1 131 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 EFHBQ8N7U6 833 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 C3orf20Q8ND61 904 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 TRIM54Q9BYV2 358 aa7.4□□□□□ -1.23
CTNND1-236ENST00000533667 FRMD8Q9BZ67 464 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-236ENST00000533667 RANBP17Q9H2T7 1088 aaKnown RBP7.4□□□□□ -1.23
CTNND1-236ENST00000533667 MADDQ8WXG6 1647 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 ASB14A6NK59 587 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 PI4K2BG5E9Z4 385 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 CAND2O75155 1236 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 MYO1DO94832 1006 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 TMEM253P0C7T8 217 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 TRIM49P0CI25 452 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 TRIM49CP0CI26 452 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 FMO5P49326 533 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 EIF3EP60228 445 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 ACTR2P61160 394 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 PRAMEP78395 509 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 P3H1Q32P28 736 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 RNF219Q5W0B1 726 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 TWF2Q6IBS0 349 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 ZNF746Q6NUN9 644 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 BRINP3Q76B58 766 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 URGCPQ8TCY9 931 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 DPF2Q92785 391 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 NSUN4Q96CB9 384 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 SENP7Q9BQF6 1050 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 KCNF1Q9H3M0 494 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 TDRD3Q9H7E2 651 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 NSMCE4AQ9NXX6 385 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 PIM2Q9P1W9 311 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 NYAP2Q9P242 653 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 PSMC3IPQ9P2W1 217 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 WARS2Q9UGM6 360 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 TSC22D4Q9Y3Q8 395 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 QRICH2Q9H0J4 1663 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 ZNF609O15014 1411 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 UCHL3P15374 230 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 RXRBP28702 533 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 ZNF543Q08ER8 600 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 XKR3Q5GH77 459 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 ASAP3Q8TDY4 903 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 ZNF483Q8TF39 744 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 ZNF473Q8WTR7 871 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 C1orf54Q8WWF1 131 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 C18orf8Q96DM3 657 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 CMTM5Q96DZ9 223 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 THOC1Q96FV9 657 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 DHX35Q9H5Z1 703 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 ADA2Q9NZK5 511 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 ZFATQ9P243 1243 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 USP15Q9Y4E8 981 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 IQCA1LA6NCM1 817 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 A8MXQ7 604 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 YWHABP31946 246 aaKnown RBP7.39□□□□□ -1.23
CTNND1-236ENST00000533667 HSD17B4P51659 736 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 CDK17Q00537 523 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 MAP3K10Q02779 954 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 CENPCQ03188 943 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 BTN2A1Q7KYR7 527 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 PRUNE1Q86TP1 453 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 RHPN2Q8IUC4 686 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 TC2NQ8N9U0 490 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 CDC26Q8NHZ8 85 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 SLC35G2Q8TBE7 412 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 LPAR1Q92633 364 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 PBXIP1Q96AQ6 731 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 EPAS1Q99814 870 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 CPVLQ9H3G5 476 aa7.39□□□□□ -1.23
CTNND1-236ENST00000533667 UNC45AQ9H3U1 944 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms