RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 TOPORSQ9NS56 1045 aaPredicted RBP13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 ZDHHC7Q9NXF8 308 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 SMC3Q9UQE7 1217 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 RFPL2O75678 378 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 KIF4AO95239 1232 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 EDN1P05305 212 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 MYBP10242 640 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 NUBP1P53384 320 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 SMTNP53814 917 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 TDGQ13569 410 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 NAB2Q15742 525 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 RTP2Q5QGT7 225 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 DCLRE1AQ6PJP8 1040 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 ALYREFQ86V81 257 aaKnown RBP13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 GLYCTKQ8IVS8 523 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 HASPINQ8TF76 798 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 PIK3R5Q8WYR1 880 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 SMG7Q92540 1137 aaKnown RBP13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 CDK5RAP3Q96JB5 506 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 UROC1Q96N76 676 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 ACO2Q99798 780 aaKnown RBP13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 NTPCRQ9BSD7 190 aaKnown RBP13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 MMTAG2Q9BU76 263 aaKnown RBP13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 CCDC94Q9BW85 323 aaPredicted RBP13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 PRKD2Q9BZL6 878 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 IRF2BPLQ9H1B7 796 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 IGSF9Q9P2J2 1179 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 ARHGAP28Q9P2N2 729 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 CACNG4Q9UBN1 327 aa13.63□□□□□ -0.23
CAPRIN1-213ENST00000533562 VWA3AA6NCI4 1184 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 TRAPPC3O43617 180 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 B3GAT3O94766 335 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 PAPLNO95428 1278 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 RPL17P18621 184 aaKnown RBP13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 GUCY2CP25092 1073 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 GBP2P32456 591 aaPredicted RBP13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 GRM5P41594 1212 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 VASPP50552 380 aaPredicted RBP13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 STRN3Q13033 797 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 PSMD5Q16401 504 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 HYIQ5T013 277 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 LARP1BQ659C4 914 aaKnown RBP13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 PRSS55Q6UWB4 352 aaPredicted RBP13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 DAW1Q8N136 415 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 LNX1Q8TBB1 728 aaPredicted RBP13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 FEZF2Q8TBJ5 459 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 PPP1R10Q96QC0 940 aaKnown RBP13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 CLSTN3Q9BQT9 956 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 RUSC1Q9BVN2 902 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 CXCL16Q9H2A7 254 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 MFSD1Q9H3U5 465 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 KCNK12Q9HB15 430 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 PTPRHQ9HD43 1115 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 SLC38A7Q9NVC3 462 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 KCND2Q9NZV8 630 aa13.62□□□□□ -0.23
CAPRIN1-213ENST00000533562 ZFHX2Q9C0A1 2572 aaPredicted RBP13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 MTCL1Q9Y4B5 1905 aaKnown RBP13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 SMIM28A0A1B0GU29 152 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 SFI1A8K8P3 1242 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 TMEM189-UBE2V1I3L0A0 370 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 ZMYND10O75800 440 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 MCF2P10911 925 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 PLS3P13797 630 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 VCPP55072 806 aaKnown RBP13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 ZNF568Q3ZCX4 644 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 LIN9Q5TKA1 542 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 ALKAL1Q6UXT8 129 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 KCNK18Q7Z418 384 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 SYT2Q8N9I0 419 aaPredicted RBP13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 SPIRE2Q8WWL2 714 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 NXPE3Q969Y0 559 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 ZNF707Q96C28 371 aaPredicted RBP13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 DDX27Q96GQ7 796 aaKnown RBP13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 AK8Q96MA6 479 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 ACAP3Q96P50 834 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 TARS2Q9BW92 718 aaKnown RBP13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 CLUHO75153 1309 aa13.61□□□□□ -0.23
CAPRIN1-213ENST00000533562 H0YCG3 227 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 SLC16A4O15374 487 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 SLC26A4O43511 780 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 CD2BP2O95400 341 aaKnown RBP13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 BMP15O95972 392 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 PDGFBP01127 241 aaPredicted RBP13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 HNRNPA1P09651 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 PLA2G4BP0C869 781 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 MRE11P49959 708 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 CLCNKBP51801 687 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 OSTNP61366 133 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 RAD51AP2Q09MP3 1159 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 MAPK7Q13164 816 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 UPP1Q16831 310 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 XKR4Q5GH76 650 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 GLRA4Q5JXX5 417 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 MPZL3Q6UWV2 235 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 PRSS33Q8NF86 280 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 TBC1D32Q96NH3 1257 aa13.6□□□□□ -0.23
CAPRIN1-213ENST00000533562 PNMA5Q96PV4 448 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms