RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 INSL6Q9Y581 213 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 TRIP11Q15643 1979 aa18.98■□□□□ 0.63
NXF1-216ENST00000533499 FAM189A1O60320 539 aa18.97■□□□□ 0.63
NXF1-216ENST00000533499 ADRB2P07550 413 aa18.97■□□□□ 0.63
NXF1-216ENST00000533499 PBX2P40425 430 aa18.97■□□□□ 0.63
NXF1-216ENST00000533499 FKBP3Q00688 224 aaKnown RBP18.97■□□□□ 0.63
NXF1-216ENST00000533499 HSP90AA2PQ14568 343 aaPredicted RBP18.97■□□□□ 0.63
NXF1-216ENST00000533499 CRELD2Q6UXH1 353 aaPredicted RBP18.97■□□□□ 0.63
NXF1-216ENST00000533499 FIBCD1Q8N539 461 aa18.97■□□□□ 0.63
NXF1-216ENST00000533499 CASD1Q96PB1 797 aa18.97■□□□□ 0.63
NXF1-216ENST00000533499 MRPL9Q9BYD2 267 aaKnown RBP18.97■□□□□ 0.63
NXF1-216ENST00000533499 PRO3102Q9H379 93 aa18.97■□□□□ 0.63
NXF1-216ENST00000533499 MIOSQ9NXC5 875 aa18.97■□□□□ 0.63
NXF1-216ENST00000533499 LCHNA4D1U4 455 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 DLATP10515 647 aaKnown RBP18.96■□□□□ 0.63
NXF1-216ENST00000533499 EPB41P11171 864 aaKnown RBP18.96■□□□□ 0.63
NXF1-216ENST00000533499 CCDC40Q4G0X9 1142 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 TTI2Q6NXR4 508 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 SLC9A9Q8IVB4 645 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 BRSK2Q8IWQ3 736 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 FAM186BQ8IYM0 893 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 CMTR2Q8IYT2 770 aaKnown RBP18.96■□□□□ 0.63
NXF1-216ENST00000533499 CRIPAKQ8N1N5 446 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 LRRC43Q8N309 656 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 KIF12Q96FN5 646 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 DUSP9Q99956 384 aaKnown RBP18.96■□□□□ 0.63
NXF1-216ENST00000533499 SRRTQ9BXP5 876 aaKnown RBP18.96■□□□□ 0.63
NXF1-216ENST00000533499 NAT10Q9H0A0 1025 aaKnown RBP18.96■□□□□ 0.63
NXF1-216ENST00000533499 PDE11AQ9HCR9 933 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 TBC1D13Q9NVG8 400 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 DMAC2Q9NW81 257 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 KANSL3Q9P2N6 904 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 HCSTQ9UBK5 93 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 FNDC1Q4ZHG4 1894 aaPredicted RBP18.96■□□□□ 0.63
NXF1-216ENST00000533499 GBF1Q92538 1859 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 TDRD15B5MCY1 1934 aaKnown RBP18.96■□□□□ 0.63
NXF1-216ENST00000533499 TRIOBPQ9H2D6 2365 aa18.96■□□□□ 0.63
NXF1-216ENST00000533499 IL18RAPO95256 599 aa18.95■□□□□ 0.62
NXF1-216ENST00000533499 THP07101 528 aa18.95■□□□□ 0.62
NXF1-216ENST00000533499 CA3P07451 260 aa18.95■□□□□ 0.62
NXF1-216ENST00000533499 KRT13P13646 458 aa18.95■□□□□ 0.62
NXF1-216ENST00000533499 ERCC5P28715 1186 aaPredicted RBP18.95■□□□□ 0.62
NXF1-216ENST00000533499 PSMC2P35998 433 aaKnown RBP18.95■□□□□ 0.62
NXF1-216ENST00000533499 HTRA4P83105 476 aaPredicted RBP18.95■□□□□ 0.62
NXF1-216ENST00000533499 TFAMQ00059 246 aaKnown RBP18.95■□□□□ 0.62
NXF1-216ENST00000533499 MYBPC2Q14324 1141 aa18.95■□□□□ 0.62
NXF1-216ENST00000533499 RAB30Q15771 203 aa18.95■□□□□ 0.62
NXF1-216ENST00000533499 LMBRD2Q68DH5 695 aaPredicted RBP18.95■□□□□ 0.62
NXF1-216ENST00000533499 JADE1Q6IE81 842 aa18.95■□□□□ 0.62
NXF1-216ENST00000533499 FNBP1Q96RU3 617 aa18.95■□□□□ 0.62
NXF1-216ENST00000533499 PBX4Q9BYU1 374 aa18.95■□□□□ 0.62
NXF1-216ENST00000533499 NKX2-4Q9H2Z4 354 aa18.95■□□□□ 0.62
NXF1-216ENST00000533499 PLAGL2Q9UPG8 496 aa18.95■□□□□ 0.62
NXF1-216ENST00000533499 PCDHA11Q9Y5I1 949 aa18.95■□□□□ 0.62
NXF1-216ENST00000533499 SMIM28A0A1B0GU29 152 aa18.94■□□□□ 0.62
NXF1-216ENST00000533499 TTC26A0AVF1 554 aa18.94■□□□□ 0.62
NXF1-216ENST00000533499 PTGESO14684 152 aa18.94■□□□□ 0.62
NXF1-216ENST00000533499 MEFVO15553 781 aaPredicted RBP18.94■□□□□ 0.62
NXF1-216ENST00000533499 ZC3H11AO75152 810 aaKnown RBP eCLIP18.94■□□□□ 0.62
NXF1-216ENST00000533499 AKAP3O75969 853 aa18.94■□□□□ 0.62
NXF1-216ENST00000533499 FGFR1OPO95684 399 aaKnown RBP18.94■□□□□ 0.62
NXF1-216ENST00000533499 NFICP08651 508 aa18.94■□□□□ 0.62
NXF1-216ENST00000533499 CYP24A1Q07973 514 aa18.94■□□□□ 0.62
NXF1-216ENST00000533499 GRIK3Q13003 919 aa18.94■□□□□ 0.62
NXF1-216ENST00000533499 TMEM132DQ14C87 1099 aa18.94■□□□□ 0.62
NXF1-216ENST00000533499 NFIL3Q16649 462 aa18.94■□□□□ 0.62
NXF1-216ENST00000533499 HSP90AA4PQ58FG1 418 aa18.94■□□□□ 0.62
NXF1-216ENST00000533499 CD302Q8IX05 232 aa18.94■□□□□ 0.62
NXF1-216ENST00000533499 ZNF689Q96CS4 500 aaPredicted RBP18.94■□□□□ 0.62
NXF1-216ENST00000533499 PLEKHA5Q9HAU0 1116 aa18.94■□□□□ 0.62
NXF1-216ENST00000533499 MTUS1Q9ULD2 1270 aa18.94■□□□□ 0.62
NXF1-216ENST00000533499 YBX2Q9Y2T7 364 aaKnown RBP18.94■□□□□ 0.62
NXF1-216ENST00000533499 MRPL42Q9Y6G3 142 aaKnown RBP18.94■□□□□ 0.62
NXF1-216ENST00000533499 A0A1W2PPC1 479 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 CASTOR2A6NHX0 329 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 CLSTN1O94985 981 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 TNNI1P19237 187 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 WNT7BP56706 349 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 SURF1Q15526 300 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 LRRC55Q6ZSA7 311 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 ZNF280BQ86YH2 543 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 RABGGTAQ92696 567 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 C18orf25Q96B23 403 aaPredicted RBP18.93■□□□□ 0.62
NXF1-216ENST00000533499 FAM84AQ96KN4 292 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 FBXL18Q96ME1 805 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 ZMAT2Q96NC0 199 aaKnown RBP18.93■□□□□ 0.62
NXF1-216ENST00000533499 ASB7Q9H672 318 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 MMRN2Q9H8L6 949 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 CNTN3Q9P232 1028 aa18.93■□□□□ 0.62
NXF1-216ENST00000533499 DDHD2O94830 711 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 TMEM191BP0C7N4 346 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 PBX3P40426 434 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 OR1G1P47890 313 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 GUCY2FP51841 1108 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 DCAF17Q5H9S7 520 aaPredicted RBP18.92■□□□□ 0.62
NXF1-216ENST00000533499 CT47A1Q5JQC4 288 aaPredicted RBP18.92■□□□□ 0.62
NXF1-216ENST00000533499 TCERG1LQ5VWI1 586 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 PPP2R2DQ66LE6 453 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 ALKAL1Q6UXT8 129 aa18.92■□□□□ 0.62
NXF1-216ENST00000533499 AOPEPQ8N6M6 819 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms