RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TTC26A0AVF1 554 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 TGFB1I1O43294 461 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 THP07101 528 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 ADRB2P07550 413 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 CXCL8P10145 99 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 KCNE1P15382 129 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 FOSL2P15408 326 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 GARTP22102 1010 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 IGFBP4P22692 258 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 DNAJB1P25685 340 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 PPM1AP35813 382 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 PLCB3Q01970 1234 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 TUSC3Q13454 348 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 CAMK1Q14012 370 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 ENOX2Q16206 610 aaKnown RBP13.07□□□□□ -0.32
SSBP3-214ENST00000533209 GLRA4Q5JXX5 417 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 CRELD2Q6UXH1 353 aaPredicted RBP13.07□□□□□ -0.32
SSBP3-214ENST00000533209 TMEM173Q86WV6 379 aaPredicted RBP13.07□□□□□ -0.32
SSBP3-214ENST00000533209 ZSWIM2Q8NEG5 633 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 BCL7CQ8WUZ0 217 aaPredicted RBP13.07□□□□□ -0.32
SSBP3-214ENST00000533209 POMGNT1Q8WZA1 660 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 ERCC4Q92889 916 aaPredicted RBP13.07□□□□□ -0.32
SSBP3-214ENST00000533209 ZMAT2Q96NC0 199 aaKnown RBP13.07□□□□□ -0.32
SSBP3-214ENST00000533209 CBWD1Q9BRT8 395 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 LMAN2LQ9H0V9 348 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 PLEKHA5Q9HAU0 1116 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 LMCD1Q9NZU5 365 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 CNTN3Q9P232 1028 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 STXBP5LQ9Y2K9 1186 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 PCDHA5Q9Y5H7 936 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 RALGAPA2Q2PPJ7 1873 aa13.07□□□□□ -0.32
SSBP3-214ENST00000533209 KIAA1671Q9BY89 1806 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 CARNS1A5YM72 827 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 NRP1O14786 923 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 ALDH2P05091 517 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 ACOT2P49753 483 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 KNOP1Q1ED39 458 aaKnown RBP13.06□□□□□ -0.32
SSBP3-214ENST00000533209 ARMCX5Q6P1M9 558 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 SMARCE1Q969G3 411 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 MRPL38Q96DV4 380 aaKnown RBP13.06□□□□□ -0.32
SSBP3-214ENST00000533209 IGSF21Q96ID5 467 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 GSDMAQ96QA5 445 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 PCIF1Q9H4Z3 704 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 RPF1Q9H9Y2 349 aaKnown RBP13.06□□□□□ -0.32
SSBP3-214ENST00000533209 AGPAT3Q9NRZ7 376 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 CACNG4Q9UBN1 327 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 HOOK1Q9UJC3 728 aaKnown RBP13.06□□□□□ -0.32
SSBP3-214ENST00000533209 LZTS1Q9Y250 596 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 FAN1Q9Y2M0 1017 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 NLRC5Q86WI3 1866 aa13.06□□□□□ -0.32
SSBP3-214ENST00000533209 COL4A4P53420 1690 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-214ENST00000533209 CASTOR2A6NHX0 329 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 LACTBL1A8MY62 500 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 F8W810 466 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 SMC2O95347 1197 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 OR1G1P47890 313 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 SNRPFP62306 86 aaKnown RBP13.05□□□□□ -0.32
SSBP3-214ENST00000533209 POU5F1Q01860 360 aaKnown RBP13.05□□□□□ -0.32
SSBP3-214ENST00000533209 UBE3AQ05086 875 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 SOX4Q06945 474 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-214ENST00000533209 POF1BQ8WVV4 589 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 RABGGTAQ92696 567 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 SAAL1Q96ER3 474 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 PAAF1Q9BRP4 392 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 FAM213AQ9BRX8 229 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 VN1R3Q9BXE9 311 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 KCTD10Q9H3F6 313 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 RMND1Q9NWS8 449 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 MARCH5Q9NX47 278 aa13.05□□□□□ -0.32
SSBP3-214ENST00000533209 PRG3Q9Y2Y8 225 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-214ENST00000533209 GOLGA8IPA6NC78 632 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 GOLGA8JA6NMD2 632 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 KIAA0391O15091 583 aaKnown RBP13.04□□□□□ -0.32
SSBP3-214ENST00000533209 CLIC2O15247 247 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 EXTL3O43909 919 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 EFEMP2O95967 443 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 LDHAP00338 332 aaKnown RBP13.04□□□□□ -0.32
SSBP3-214ENST00000533209 WNT7BP56706 349 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 KRT17Q04695 432 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 PPP2R3AQ06190 1150 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 ZBTB6Q15916 424 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 PTPROQ16827 1216 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 HS2ST1Q7LGA3 356 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 DDX53Q86TM3 631 aaKnown RBP13.04□□□□□ -0.32
SSBP3-214ENST00000533209 C12orf56Q8IXR9 622 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 SMYD4Q8IYR2 804 aaPredicted RBP13.04□□□□□ -0.32
SSBP3-214ENST00000533209 GUF1Q8N442 669 aaKnown RBP13.04□□□□□ -0.32
SSBP3-214ENST00000533209 C18orf25Q96B23 403 aaPredicted RBP13.04□□□□□ -0.32
SSBP3-214ENST00000533209 TMEM169Q96HH4 297 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 GOLGA2P5Q9HBQ8 144 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 SLC38A7Q9NVC3 462 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 HSPBP1Q9NZL4 362 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 CGNQ9P2M7 1197 aaKnown RBP13.04□□□□□ -0.32
SSBP3-214ENST00000533209 MAPK8IP1Q9UQF2 711 aa13.04□□□□□ -0.32
SSBP3-214ENST00000533209 PRRC2BQ5JSZ5 2229 aaKnown RBP13.03□□□□□ -0.32
SSBP3-214ENST00000533209 PDXKO00764 312 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 FSCN2O14926 492 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 CSPG5O95196 566 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 IGFBP6P24592 240 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-214ENST00000533209 IRS1P35568 1242 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms