RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TLR3O15455 904 aaKnown RBP20.05■□□□□ 0.8
SMPD1-208ENST00000533123 EXTL3O43909 919 aa20.05■□□□□ 0.8
SMPD1-208ENST00000533123 CAND2O75155 1236 aa20.05■□□□□ 0.8
SMPD1-208ENST00000533123 CCDC175P0C221 793 aa20.05■□□□□ 0.8
SMPD1-208ENST00000533123 MEA1Q16626 185 aa20.05■□□□□ 0.8
SMPD1-208ENST00000533123 C1orf53Q5VUE5 145 aa20.05■□□□□ 0.8
SMPD1-208ENST00000533123 CRELD2Q6UXH1 353 aaPredicted RBP20.05■□□□□ 0.8
SMPD1-208ENST00000533123 NECAB2Q7Z6G3 386 aa20.05■□□□□ 0.8
SMPD1-208ENST00000533123 CEP120Q8N960 986 aa20.05■□□□□ 0.8
SMPD1-208ENST00000533123 CAGE1Q8TC20 777 aa20.05■□□□□ 0.8
SMPD1-208ENST00000533123 BAP1Q92560 729 aa20.05■□□□□ 0.8
SMPD1-208ENST00000533123 DCDC2CA8MYV0 355 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 FAM189A1O60320 539 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 OSTNP61366 133 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 FAAP100Q0VG06 881 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 TSR1Q2NL82 804 aaKnown RBP20.04■□□□□ 0.8
SMPD1-208ENST00000533123 THNSL1Q8IYQ7 743 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 ZNF397Q8NF99 534 aaPredicted RBP20.04■□□□□ 0.8
SMPD1-208ENST00000533123 LRRC53A6NM62 1247 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 KIAA0391O15091 583 aaKnown RBP20.04■□□□□ 0.8
SMPD1-208ENST00000533123 CD52P31358 61 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 TNFSF9P41273 254 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 LPIN1Q14693 890 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 MBTPS1Q14703 1052 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 LRRC26Q2I0M4 334 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 NOTUMQ6P988 496 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 RRAGAQ7L523 313 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 IQCDQ96DY2 449 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 TOX2Q96NM4 488 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 NLRC4Q9NPP4 1024 aa20.04■□□□□ 0.8
SMPD1-208ENST00000533123 ZNF233A6NK53 670 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 LDHAP00338 332 aaKnown RBP20.03■□□□□ 0.8
SMPD1-208ENST00000533123 TRIM49P0CI25 452 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 TRIM49CP0CI26 452 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 ACTN1P12814 892 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 PPP2R3AQ06190 1150 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 BFSP2Q13515 415 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 ADPGKQ9BRR6 497 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 PADI3Q9ULW8 664 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 UMODL1Q5DID0 1318 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 OGTO15294 1046 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 SLC9A1P19634 815 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 DLG4P78352 724 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 BFSP1Q12934 665 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 SYT10Q6XYQ8 523 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 INTS8Q75QN2 995 aaKnown RBP20.03■□□□□ 0.8
SMPD1-208ENST00000533123 LRRC8DQ7L1W4 858 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 PLEKHO2Q8TD55 490 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 CCDC127Q96BQ5 260 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 EIF2AQ9BY44 585 aaKnown RBP20.03■□□□□ 0.8
SMPD1-208ENST00000533123 KIAA1586Q9HCI6 787 aa20.03■□□□□ 0.8
SMPD1-208ENST00000533123 ZNHIT6Q9NWK9 470 aaKnown RBP20.03■□□□□ 0.8
SMPD1-208ENST00000533123 GPR182O15218 404 aa20.02■□□□□ 0.8
SMPD1-208ENST00000533123 PLEKP08567 350 aaPredicted RBP20.02■□□□□ 0.8
SMPD1-208ENST00000533123 MCF2P10911 925 aa20.02■□□□□ 0.8
SMPD1-208ENST00000533123 SELPP16109 830 aa20.02■□□□□ 0.8
SMPD1-208ENST00000533123 AXLP30530 894 aa20.02■□□□□ 0.8
SMPD1-208ENST00000533123 POLR2FP61218 127 aaKnown RBP20.02■□□□□ 0.8
SMPD1-208ENST00000533123 SLC27A1Q6PCB7 646 aa20.02■□□□□ 0.8
SMPD1-208ENST00000533123 TRIM65Q6PJ69 517 aa20.02■□□□□ 0.8
SMPD1-208ENST00000533123 CACNA2D4Q7Z3S7 1137 aa20.02■□□□□ 0.8
SMPD1-208ENST00000533123 TMEM192Q8IY95 271 aa20.02■□□□□ 0.8
SMPD1-208ENST00000533123 LZTFL1Q9NQ48 299 aa20.02■□□□□ 0.8
SMPD1-208ENST00000533123 MAPK13O15264 365 aa20.02■□□□□ 0.79
SMPD1-208ENST00000533123 NDUFA10O95299 355 aa20.02■□□□□ 0.79
SMPD1-208ENST00000533123 NPTXRO95502 500 aa20.02■□□□□ 0.79
SMPD1-208ENST00000533123 KRT13P13646 458 aa20.02■□□□□ 0.79
SMPD1-208ENST00000533123 CAPN2P17655 700 aa20.02■□□□□ 0.79
SMPD1-208ENST00000533123 VAMP7P51809 220 aa20.02■□□□□ 0.79
SMPD1-208ENST00000533123 CYP24A1Q07973 514 aa20.02■□□□□ 0.79
SMPD1-208ENST00000533123 PAK2Q13177 524 aa20.02■□□□□ 0.79
SMPD1-208ENST00000533123 DPY19L2P1Q6NXN4 242 aa20.02■□□□□ 0.79
SMPD1-208ENST00000533123 MFSD14AQ96MC6 490 aa20.02■□□□□ 0.79
SMPD1-208ENST00000533123 GANQ9H2C0 597 aa20.02■□□□□ 0.79
SMPD1-208ENST00000533123 RBAKQ9NYW8 714 aaPredicted RBP20.02■□□□□ 0.79
SMPD1-208ENST00000533123 CEP72Q9P209 647 aa20.02■□□□□ 0.79
SMPD1-208ENST00000533123 PLAGL2Q9UPG8 496 aa20.02■□□□□ 0.79
SMPD1-208ENST00000533123 REXO2Q9Y3B8 237 aaKnown RBP20.02■□□□□ 0.79
SMPD1-208ENST00000533123 GTF2F1P35269 517 aaKnown RBP eCLIP20.01■□□□□ 0.79
SMPD1-208ENST00000533123 WNT7BP56706 349 aa20.01■□□□□ 0.79
SMPD1-208ENST00000533123 PDXDC1Q6P996 788 aa20.01■□□□□ 0.79
SMPD1-208ENST00000533123 POP1Q99575 1024 aaKnown RBP20.01■□□□□ 0.79
SMPD1-208ENST00000533123 PPP1R12CQ9BZL4 782 aa20.01■□□□□ 0.79
SMPD1-208ENST00000533123 HIPK3Q9H422 1215 aa20.01■□□□□ 0.79
SMPD1-208ENST00000533123 NHEJ1Q9H9Q4 299 aaPredicted RBP20.01■□□□□ 0.79
SMPD1-208ENST00000533123 ERVK-5Q9HDB9 667 aa20.01■□□□□ 0.79
SMPD1-208ENST00000533123 CPSF3Q9UKF6 684 aaKnown RBP20.01■□□□□ 0.79
SMPD1-208ENST00000533123 EPN1Q9Y6I3 576 aaPredicted RBP20.01■□□□□ 0.79
SMPD1-208ENST00000533123 PITPNM1O00562 1244 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 PON1P27169 355 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 HNRNPH3P31942 346 aaKnown RBP20■□□□□ 0.79
SMPD1-208ENST00000533123 EXOC3L4Q17RC7 722 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 TWF2Q6IBS0 349 aaKnown RBP20■□□□□ 0.79
SMPD1-208ENST00000533123 GCNT4Q9P109 453 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 FANCGO15287 622 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 ABL1P00519 1130 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 STAG3L1P0CL83 205 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 DLATP10515 647 aaKnown RBP20■□□□□ 0.79
SMPD1-208ENST00000533123 CBWD6Q4V339 395 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 CBWD3Q5JTY5 395 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms