RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 SLC10A6Q3KNW5 377 aa15.26■□□□□ 0.03
USF1-209ENST00000529476 KLHL10Q6JEL2 608 aa15.26■□□□□ 0.03
USF1-209ENST00000529476 CRELD2Q6UXH1 353 aaPredicted RBP15.26■□□□□ 0.03
USF1-209ENST00000529476 LRRC55Q6ZSA7 311 aa15.26■□□□□ 0.03
USF1-209ENST00000529476 GSTCDQ8NEC7 633 aa15.26■□□□□ 0.03
USF1-209ENST00000529476 GOLGA5Q8TBA6 731 aa15.26■□□□□ 0.03
USF1-209ENST00000529476 FAM213AQ9BRX8 229 aa15.26■□□□□ 0.03
USF1-209ENST00000529476 CGNQ9P2M7 1197 aaKnown RBP15.26■□□□□ 0.03
USF1-209ENST00000529476 THEGQ9P2T0 379 aa15.26■□□□□ 0.03
USF1-209ENST00000529476 CPSF3Q9UKF6 684 aaKnown RBP15.26■□□□□ 0.03
USF1-209ENST00000529476 NLRC5Q86WI3 1866 aa15.26■□□□□ 0.03
USF1-209ENST00000529476 LINC01553A4QN01 128 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 PTGESO14684 152 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 INPPL1O15357 1258 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 CALUO43852 315 aaPredicted RBP15.25■□□□□ 0.03
USF1-209ENST00000529476 EXTL3O43909 919 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 POMCP01189 267 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 NR3C1P04150 777 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 PMS1P54277 932 aaKnown RBP15.25■□□□□ 0.03
USF1-209ENST00000529476 STIM1Q13586 685 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 KYAT1Q16773 422 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 ZCWPW2Q504Y3 356 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 CENPPQ6IPU0 288 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 C12orf56Q8IXR9 622 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 LRRC43Q8N309 656 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 GPD1LQ8N335 351 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 FIBCD1Q8N539 461 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 URGCPQ8TCY9 931 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 SYAP1Q96A49 352 aaPredicted RBP15.25■□□□□ 0.03
USF1-209ENST00000529476 DHTKD1Q96HY7 919 aaPredicted RBP15.25■□□□□ 0.03
USF1-209ENST00000529476 SNX27Q96L92 541 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 RPS6KC1Q96S38 1066 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 RPF1Q9H9Y2 349 aaKnown RBP15.25■□□□□ 0.03
USF1-209ENST00000529476 TOPORSQ9NS56 1045 aaPredicted RBP15.25■□□□□ 0.03
USF1-209ENST00000529476 TBC1D13Q9NVG8 400 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 PLAGL2Q9UPG8 496 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 TRAF3IP3Q9Y228 551 aa15.25■□□□□ 0.03
USF1-209ENST00000529476 MRPL42Q9Y6G3 142 aaKnown RBP15.25■□□□□ 0.03
USF1-209ENST00000529476 TRIM49BA6NDI0 452 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 PSMA7O14818 248 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 KIAA0391O15091 583 aaKnown RBP15.24■□□□□ 0.03
USF1-209ENST00000529476 B4GALT3O60512 393 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 LDHAP00338 332 aaKnown RBP15.24■□□□□ 0.03
USF1-209ENST00000529476 PPP1R2P41236 205 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 NLRP12P59046 1061 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 TAP1Q03518 808 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 SKOR2Q2VWA4 1001 aaPredicted RBP15.24■□□□□ 0.03
USF1-209ENST00000529476 DPCR1Q3MIW9 517 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 GLRA4Q5JXX5 417 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 ANKRD40Q6AI12 368 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 ALKAL1Q6UXT8 129 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 SPRED2Q7Z698 418 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 ZNF280BQ86YH2 543 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 CBWD2Q8IUF1 395 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 XXYLT1Q8NBI6 393 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 NELFBQ8WX92 580 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 P2RX5Q93086 422 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 TIFAQ96CG3 184 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 FAM212AQ96EL1 285 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 NECAB3Q96P71 396 aaPredicted RBP15.24■□□□□ 0.03
USF1-209ENST00000529476 MRPL9Q9BYD2 267 aaKnown RBP15.24■□□□□ 0.03
USF1-209ENST00000529476 CWH43Q9H720 699 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 DMAC2Q9NW81 257 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 CTNND2Q9UQB3 1225 aa15.24■□□□□ 0.03
USF1-209ENST00000529476 SMIM28A0A1B0GU29 152 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 TTC26A0AVF1 554 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 LACTBL1A8MY62 500 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 EXOC3O60645 756 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 DDHD2O94830 711 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 LINC00271P0C7V0 271 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 CCNE1P24864 410 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 WNT7BP56706 349 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 MRPS5P82675 430 aaKnown RBP15.23■□□□□ 0.03
USF1-209ENST00000529476 RNASELQ05823 741 aaKnown RBP15.23■□□□□ 0.03
USF1-209ENST00000529476 SPAG1Q07617 926 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 XKR4Q5GH76 650 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 PPP2R2DQ66LE6 453 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 SLC9A9Q8IVB4 645 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 MLKLQ8NB16 471 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 RDH13Q8NBN7 331 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 RSPH1Q8WYR4 309 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 FBXL18Q96ME1 805 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 ZMAT2Q96NC0 199 aaKnown RBP15.23■□□□□ 0.03
USF1-209ENST00000529476 NRDE2Q9H7Z3 1164 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 SLC28A3Q9HAS3 691 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 PLEKHA5Q9HAU0 1116 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 RBAKQ9NYW8 714 aaPredicted RBP15.23■□□□□ 0.03
USF1-209ENST00000529476 CNTN3Q9P232 1028 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 KANSL3Q9P2N6 904 aa15.23■□□□□ 0.03
USF1-209ENST00000529476 NCOR1O75376 2440 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 ZNF233A6NK53 670 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 TULP1O00294 542 aaPredicted RBP15.22■□□□□ 0.03
USF1-209ENST00000529476 THP07101 528 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 ADRB2P07550 413 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 KCNE1P15382 129 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 NR2F2P24468 414 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 CASP4P49662 377 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 STX17P56962 302 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 PPP2R3AQ06190 1150 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 GRIK3Q13003 919 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms