RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 PRKCBP05771 671 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 TMOD1P28289 359 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 TNFRSF8P28908 595 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 CXCR5P32302 372 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 ACOT2P49753 483 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 ARHGAP1Q07960 439 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 C2orf54Q08AI8 447 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 KYAT1Q16773 422 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 FAM110CQ1W6H9 321 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 SPRYD7Q5W111 196 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 TSHZ1Q6ZSZ6 1077 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 RASGEF1CQ8N431 466 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 RNF149Q8NC42 400 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 BRI3BPQ8WY22 251 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 TRIM11Q96F44 468 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 FAXDC2Q96IV6 333 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 RPS6KC1Q96S38 1066 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 TCHPQ9BT92 498 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 FZD8Q9H461 694 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 ZCCHC17Q9NP64 241 aaKnown RBP15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 UVRAGQ9P2Y5 699 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 CNTNAP2Q9UHC6 1331 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 TMCO5BA8MYB1 307 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 KCNK3O14649 394 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 SEC31AO94979 1220 aaKnown RBP15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 CLSTN1O94985 981 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 POTEJP0CG39 1038 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 CHRNB2P17787 502 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 MARK3P27448 753 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 PIK3CAP42336 1068 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 CBX1P83916 185 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 BIRC3Q13489 604 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 FAM187BQ17R55 369 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 IQSEC1Q6DN90 963 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 ACAD10Q6JQN1 1059 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 EFCAB12Q6NXP0 572 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 TRIM72Q6ZMU5 477 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 DPP9Q86TI2 863 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 NOP9Q86U38 636 aaKnown RBP15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 IFNLR1Q8IU57 520 aaPredicted RBP15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 EIF1ADQ8N9N8 165 aaKnown RBP15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 USP38Q8NB14 1042 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 SLC20A1Q8WUM9 679 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 KAT5Q92993 513 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 TATDN2Q93075 761 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 ZBTB45Q96K62 511 aaPredicted RBP15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.87■□□□□ 0.137e-6■■■■□ 21.2
ECHDC1-220ENST00000528402 IMPG2Q9BZV3 1241 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 THAP2Q9H0W7 228 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 PDE11AQ9HCR9 933 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 PRMT7Q9NVM4 692 aaPredicted RBP15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 ANKFY1Q9P2R3 1169 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 TMEM59LQ9UK28 342 aa15.87■□□□□ 0.13
ECHDC1-220ENST00000528402 SLC15A5A6NIM6 579 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 PGRMC1O00264 195 aaKnown RBP15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 PHACTR2O75167 634 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 SRGAP2CP0DJJ0 459 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 MYBL1P10243 752 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 ABCB4P21439 1286 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 PROZP22891 400 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 PTENP60484 403 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 FMO1Q01740 532 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 TNFAIP2Q03169 654 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 MKRN4PQ13434 485 aaPredicted RBP15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 GRB14Q14449 540 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 TDRD10Q5VZ19 366 aaKnown RBP15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 C8orf74Q6P047 294 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 MPZL3Q6UWV2 235 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 PLEKHH3Q7Z736 793 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 IFT20Q8IY31 132 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 HAPLN2Q9GZV7 340 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 CARD9Q9H257 536 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 ABHD16BQ9H3Z7 469 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 PDGFCQ9NRA1 345 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 TOPORSQ9NS56 1045 aaPredicted RBP15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 STIM2Q9P246 746 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 CTTNBP2NLQ9P2B4 639 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 GTF3C4Q9UKN8 822 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 CNTN6Q9UQ52 1028 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 TNFSF13BQ9Y275 285 aa15.86■□□□□ 0.13
ECHDC1-220ENST00000528402 BUB1BO60566 1050 aaPredicted RBP15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 LGALS2P05162 132 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 CYP1A2P05177 515 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 HOXC6P09630 235 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 PHKA2P46019 1235 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 CDC42EP1Q00587 391 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 GABPB1Q06547 395 aaPredicted RBP15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 DUOXA2Q1HG44 320 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 GPR142Q7Z601 462 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 SLC47A2Q86VL8 602 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 RHPN2Q8IUC4 686 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 METTL13Q8N6R0 699 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 UBL4BQ8N7F7 174 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 DDX1Q92499 740 aaKnown RBP15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 COPS5Q92905 334 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 PSMB7Q99436 277 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 LRRC1Q9BTT6 524 aa15.85■□□□□ 0.13
ECHDC1-220ENST00000528402 UBXN6Q9BZV1 441 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms