RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 OR1G1P47890 313 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 YARSP54577 528 aaKnown RBP13.99□□□□□ -0.17
VEGFA-224ENST00000523873 GRIK3Q13003 919 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 SLC10A6Q3KNW5 377 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 ISM2Q6H9L7 571 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 SLFN12LQ6IEE8 588 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 SLC39A11Q8N1S5 342 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 MICALL1Q8N3F8 863 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 NOC3LQ8WTT2 800 aaKnown RBP13.99□□□□□ -0.17
VEGFA-224ENST00000523873 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 CCDC34Q96HJ3 373 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 GAS2L1Q99501 681 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-224ENST00000523873 PAAF1Q9BRP4 392 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 PLVAPQ9BX97 442 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 TMEM206Q9H813 350 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 AAASQ9NRG9 546 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 AGO2Q9UKV8 859 aaKnown RBP13.99□□□□□ -0.17
VEGFA-224ENST00000523873 MAPK8IP1Q9UQF2 711 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 PRG3Q9Y2Y8 225 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-224ENST00000523873 PCDHGC5Q9Y5F6 944 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 PCDHA5Q9Y5H7 936 aa13.99□□□□□ -0.17
VEGFA-224ENST00000523873 UBE4BO95155 1302 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 TULP1O00294 542 aaPredicted RBP13.98□□□□□ -0.17
VEGFA-224ENST00000523873 TGFB1I1O43294 461 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 CLTAP09496 248 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 WNT7BP56706 349 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 SOX4Q06945 474 aaPredicted RBP13.98□□□□□ -0.17
VEGFA-224ENST00000523873 DSC1Q08554 894 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 PSMD2Q13200 908 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 CAMK1Q14012 370 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 KCNB1Q14721 858 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 NAB2Q15742 525 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 ENOX2Q16206 610 aaKnown RBP13.98□□□□□ -0.17
VEGFA-224ENST00000523873 CAMK4Q16566 473 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 BMT2Q1RMZ1 405 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 ARMCX5Q6P1M9 558 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 CRELD2Q6UXH1 353 aaPredicted RBP13.98□□□□□ -0.17
VEGFA-224ENST00000523873 ALKAL1Q6UXT8 129 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 SPPL3Q8TCT6 385 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 POF1BQ8WVV4 589 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 CCDC47Q96A33 483 aaKnown RBP13.98□□□□□ -0.17
VEGFA-224ENST00000523873 PPP1R10Q96QC0 940 aaKnown RBP13.98□□□□□ -0.17
VEGFA-224ENST00000523873 FAM213AQ9BRX8 229 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 C11orf84Q9BUA3 381 aaPredicted RBP13.98□□□□□ -0.17
VEGFA-224ENST00000523873 RPF1Q9H9Y2 349 aaKnown RBP13.98□□□□□ -0.17
VEGFA-224ENST00000523873 GOLGA2P5Q9HBQ8 144 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 MARCH5Q9NX47 278 aa13.98□□□□□ -0.17
VEGFA-224ENST00000523873 CPSF3Q9UKF6 684 aaKnown RBP13.98□□□□□ -0.17
VEGFA-224ENST00000523873 PLXNA3P51805 1871 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 SMIM28A0A1B0GU29 152 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 LACTBL1A8MY62 500 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 NRP1O14786 923 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 THP07101 528 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 IGFBP6P24592 240 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-224ENST00000523873 IRS1P35568 1242 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 ALDH7A1P49419 539 aaKnown RBP13.97□□□□□ -0.17
VEGFA-224ENST00000523873 XKR4Q5GH76 650 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 PPM1EQ8WY54 764 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 P2RX5Q93086 422 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 SMARCE1Q969G3 411 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 C18orf25Q96B23 403 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-224ENST00000523873 TMEM175Q9BSA9 504 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 AGPAT3Q9NRZ7 376 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 TOPORSQ9NS56 1045 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-224ENST00000523873 SPG21Q9NZD8 308 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 CNTN3Q9P232 1028 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 MAN1B1Q9UKM7 699 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 FAN1Q9Y2M0 1017 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 MTCH2Q9Y6C9 303 aa13.97□□□□□ -0.17
VEGFA-224ENST00000523873 CDH23Q9H251 3354 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 TTC26A0AVF1 554 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 BIN1O00499 593 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 SMC2O95347 1197 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 GARTP22102 1010 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 CYP2J2P51589 502 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 GUCY2FP51841 1108 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 ERVFC1P60507 584 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 PPP2R3AQ06190 1150 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 TUSC3Q13454 348 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 CCDC85BQ15834 202 aaPredicted RBP13.96□□□□□ -0.17
VEGFA-224ENST00000523873 KNOP1Q1ED39 458 aaKnown RBP13.96□□□□□ -0.17
VEGFA-224ENST00000523873 GPT2Q8TD30 523 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 HASPINQ8TF76 798 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 RSPH1Q8WYR4 309 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 IGSF21Q96ID5 467 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 FAM84AQ96KN4 292 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 VN1R3Q9BXE9 311 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 KCTD10Q9H3F6 313 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 HSPBP1Q9NZL4 362 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 TUBGCP4Q9UGJ1 667 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 HOOK1Q9UJC3 728 aaKnown RBP13.96□□□□□ -0.17
VEGFA-224ENST00000523873 CHD7Q9P2D1 2997 aa13.96□□□□□ -0.17
VEGFA-224ENST00000523873 CHD9Q3L8U1 2897 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 EXTL3O43909 919 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 ALDH2P05091 517 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 NFICP08651 508 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 KCNE1P15382 129 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 PPM1AP35813 382 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 PLCB3Q01970 1234 aa13.95□□□□□ -0.18
VEGFA-224ENST00000523873 KYAT1Q16773 422 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms